RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CCDC26Q8TAB7 109 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC85AQ96PX6 553 aaPredicted RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SPAG5Q96R06 1193 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SELENOSQ9BQE4 189 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 THUMPD2Q9BTF0 503 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 RBM28Q9NW13 759 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SAMM50Q9Y512 469 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 AOX1Q06278 1338 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 UQCRFS1P1P0C7P4 283 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 ASIC1P78348 528 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 PPP2R3AQ06190 1150 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TSPY2A6NKD2 308 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 GAS8O95995 478 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TSPY3P0CV98 308 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TSPY8P0CW00 308 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SETSIPP0DME0 302 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 FYB2Q5VWT5 728 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 FAM184BQ9ULE4 1060 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SPTLC2O15270 562 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 MAP3K9P80192 1104 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC152Q4G0S7 254 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CAPZA3Q96KX2 299 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC8Q9H0W5 538 aaPredicted RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 AFMP43652 599 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TRMT112Q9UI30 125 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SAMD9Q5K651 1589 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 GPATCH8Q9UKJ3 1502 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PPP1R7Q15435 360 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 MAK16Q9BXY0 300 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CSRNP2Q9H175 543 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 TET3O43151 1660 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 AKR1B15C9JRZ8 316 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 GMNNO75496 209 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 LDHCP07864 332 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PRIM1P49642 420 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CFAP157Q5JU67 520 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SEL1L2Q5TEA6 688 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 IMPG2Q9BZV3 1241 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 IMPACTQ9P2X3 320 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SOS1Q07889 1333 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 IDEP14735 1019 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC42Q96M95 316 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PREX2Q70Z35 1606 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 C11orf95C9JLR9 678 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 WASLO00401 505 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 KIF3CO14782 793 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 VWA3BQ502W6 1294 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ISM2Q6H9L7 571 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 APBB1IPQ7Z5R6 666 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 NUTM2AQ8IVF1 878 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 UBL4BQ8N7F7 174 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 NKIRAS1Q9NYS0 192 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 FRMD4BQ9Y2L6 1034 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 BLMP54132 1417 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 A0A1B0GUA9 196 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 TSNAXIP1Q2TAA8 658 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 RUFY3Q7L099 469 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 HEATR3Q7Z4Q2 680 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CACNA2D3Q8IZS8 1091 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.41□□□□□ -1.549e-8■■■■■ 48.4
RC3H1-201ENST00000258349 MTUS1Q9ULD2 1270 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ABCC2Q92887 1545 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ZNF518AQ6AHZ1 1483 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 TEX14Q8IWB6 1497 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 KLF18A0A0U1RQI7 1052 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 F6X3S4 739 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ARHGAP25P42331 645 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CYP26C1Q6V0L0 522 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC82Q8N4S0 544 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 STK24Q9Y6E0 443 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 MSH6P52701 1360 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ARHGEF5Q12774 1597 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ATP2C2O75185 946 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 TERF1P54274 439 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CFAP58Q5T655 872 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 INTS8Q75QN2 995 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 UBE3BQ7Z3V4 1068 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 IFT20Q8IY31 132 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 UBLCP1Q8WVY7 318 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ZNF830Q96NB3 372 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SYNRGQ9UMZ2 1314 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 TRIM75PA6NK02 468 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PPP1R2P41236 205 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 CHMP4BP1P59074 171 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 SARNPP82979 210 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 DNM1Q05193 864 aaKnown RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 GABPB1Q06547 395 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 KIFAP3Q92845 792 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 DNAJC25Q9H1X3 360 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 MRVI1Q9Y6F6 885 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 ZEB2O60315 1214 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 BUB1BO60566 1050 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PTGS1P23219 599 aa5.41□□□□□ -1.54
RC3H1-201ENST00000258349 BAG1Q99933 345 aaPredicted RBP5.41□□□□□ -1.54
RC3H1-201ENST00000258349 PDE1AP54750 535 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 ST5P78524 1137 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms