RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 SGSM2O43147 1006 aa11.11□□□□□ -0.63
LRRC4-201ENST00000249363 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
LRRC4-201ENST00000249363 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 EPB41L2O43491 1005 aaKnown RBP11.1□□□□□ -0.63
LRRC4-201ENST00000249363 RILPL2Q969X0 211 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 MYH2Q9UKX2 1941 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 ZNF384Q8TF68 577 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 TBC1D32Q96NH3 1257 aa11.1□□□□□ -0.63
LRRC4-201ENST00000249363 A0A0G2JLW4 131 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 BCL11AQ9H165 835 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 A0A0D9SFI3 127 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 GOLIM4O00461 696 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 POLD1P28340 1107 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
LRRC4-201ENST00000249363 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
LRRC4-201ENST00000249363 USP26Q9BXU7 913 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 RAD50Q92878 1312 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 KIF2CQ99661 725 aa11.09□□□□□ -0.63
LRRC4-201ENST00000249363 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
LRRC4-201ENST00000249363 LAMB1P07942 1786 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 HIBADHP31937 336 aaKnown RBP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 FOXP2O15409 715 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 UFL1O94874 794 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 ZNF622Q969S3 477 aaKnown RBP eCLIP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 DNAJC2Q99543 621 aaKnown RBP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 ANKIB1Q9P2G1 1089 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 FAM205AQ6ZU69 1335 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 TTLL6Q8N841 843 aa11.08□□□□□ -0.64
LRRC4-201ENST00000249363 RBM19Q9Y4C8 960 aaKnown RBP11.08□□□□□ -0.64
LRRC4-201ENST00000249363 TIAM2Q8IVF5 1701 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 HIP1O00291 1037 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 IGSF3O75054 1194 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 ADD2P35612 726 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 MPNDQ8N594 471 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 KCNB2Q92953 911 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 PSMD1Q99460 953 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 CD209Q9NNX6 404 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 CAVIN4Q5BKX8 364 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 DENND2AQ9ULE3 1009 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 TTF1Q15361 905 aaPredicted RBP11.07□□□□□ -0.64
LRRC4-201ENST00000249363 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
LRRC4-201ENST00000249363 ZNF589Q86UQ0 364 aaPredicted RBP11.07□□□□□ -0.64
LRRC4-201ENST00000249363 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
LRRC4-201ENST00000249363 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
LRRC4-201ENST00000249363 HELLSQ9NRZ9 838 aa11.06□□□□□ -0.64
LRRC4-201ENST00000249363 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
LRRC4-201ENST00000249363 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
LRRC4-201ENST00000249363 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
LRRC4-201ENST00000249363 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
LRRC4-201ENST00000249363 DPP8Q6V1X1 898 aaPredicted RBP11.05□□□□□ -0.64
LRRC4-201ENST00000249363 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 MAST3O60307 1309 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
LRRC4-201ENST00000249363 ZNF804AQ7Z570 1209 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
LRRC4-201ENST00000249363 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 SPON1Q9HCB6 807 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 LTBP3Q9NS15 1303 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 M0R2C6 588 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 KCNJ4P48050 445 aa11.05□□□□□ -0.64
LRRC4-201ENST00000249363 CWC27Q6UX04 472 aaKnown RBP11.05□□□□□ -0.64
LRRC4-201ENST00000249363 PDE6AP16499 860 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 PTH1RQ03431 593 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 KIAA2012Q0VF49 1180 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 GRIK5Q16478 980 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
LRRC4-201ENST00000249363 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
LRRC4-201ENST00000249363 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 C21orf2O43822 256 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 MAP4K1Q92918 833 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
LRRC4-201ENST00000249363 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 APPBP2Q92624 585 aa11.04□□□□□ -0.64
LRRC4-201ENST00000249363 PUS7LQ9H0K6 701 aaKnown RBP11.04□□□□□ -0.64
LRRC4-201ENST00000249363 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
LRRC4-201ENST00000249363 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 MCMDC2Q4G0Z9 681 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 NSUN4Q96CB9 384 aaKnown RBP11.03□□□□□ -0.64
LRRC4-201ENST00000249363 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
LRRC4-201ENST00000249363 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
LRRC4-201ENST00000249363 PRELPP51888 382 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 FKBP1AP62942 108 aaKnown RBP11.03□□□□□ -0.64
LRRC4-201ENST00000249363 NECTIN1Q15223 517 aa11.03□□□□□ -0.64
LRRC4-201ENST00000249363 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms