RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 KIF3AQ9Y496 699 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 MROH5Q6ZUA9 1318 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 H3BQV1 296 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 HCLS1P14317 486 aaPredicted RBP25.78■■□□□ 1.72
RNF39-201ENST00000244360 TPRNQ4KMQ1 711 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 GIMAP6Q6P9H5 292 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 SASS6Q6UVJ0 657 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 USP25Q9UHP3 1055 aa25.78■■□□□ 1.72
RNF39-201ENST00000244360 PUM3Q15397 648 aaKnown RBP25.77■■□□□ 1.72
RNF39-201ENST00000244360 MB21D2Q8IYB1 491 aaPredicted RBP25.77■■□□□ 1.72
RNF39-201ENST00000244360 LTBP4Q8N2S1 1624 aa25.77■■□□□ 1.72
RNF39-201ENST00000244360 UQCRFS1P1P0C7P4 283 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 CRKLP46109 303 aaKnown RBP25.76■■□□□ 1.71
RNF39-201ENST00000244360 TFIP11Q9UBB9 837 aaKnown RBP25.76■■□□□ 1.71
RNF39-201ENST00000244360 WDR19Q8NEZ3 1342 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 LIG1P18858 919 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 UBE3CQ15386 1083 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 SUSD4Q5VX71 490 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 CCDC102BQ68D86 513 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 LPIN2Q92539 896 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 MAP7D2Q96T17 732 aa25.76■■□□□ 1.71
RNF39-201ENST00000244360 PIH1D3Q9NQM4 214 aaKnown RBP25.76■■□□□ 1.71
RNF39-201ENST00000244360 KDM4AO75164 1064 aa25.75■■□□□ 1.71
RNF39-201ENST00000244360 ADCY5O95622 1261 aa25.75■■□□□ 1.71
RNF39-201ENST00000244360 MARCH10Q8NA82 808 aaPredicted RBP25.75■■□□□ 1.71
RNF39-201ENST00000244360 PHLPP1O60346 1717 aa25.75■■□□□ 1.71
RNF39-201ENST00000244360 SPATA31A5Q5VU36 1347 aa25.75■■□□□ 1.71
RNF39-201ENST00000244360 SPATA31A7Q8IWB4 1347 aa25.75■■□□□ 1.71
RNF39-201ENST00000244360 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
RNF39-201ENST00000244360 PHKA1P46020 1223 aa25.74■■□□□ 1.71
RNF39-201ENST00000244360 CHST3Q7LGC8 479 aa25.74■■□□□ 1.71
RNF39-201ENST00000244360 UQCRHLA0A096LP55 91 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 LOC102724428A0A0B4J2F2 783 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 ADAMTS2O95450 1211 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 UQCRHP07919 91 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 SIK1P57059 783 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 HAND2P61296 217 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 CCT2P78371 535 aaKnown RBP25.73■■□□□ 1.71
RNF39-201ENST00000244360 PARP10Q53GL7 1025 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 NCOA5Q9HCD5 579 aaKnown RBP25.73■■□□□ 1.71
RNF39-201ENST00000244360 RTL9Q8NET4 1388 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 ATP6V1AP38606 617 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 SLC9C2Q5TAH2 1124 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 PIBF1Q8WXW3 757 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 UTP14AQ9BVJ6 771 aaKnown RBP25.73■■□□□ 1.71
RNF39-201ENST00000244360 NUP62CLQ9H1M0 184 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 MYH15Q9Y2K3 1946 aa25.73■■□□□ 1.71
RNF39-201ENST00000244360 DYNC1I1O14576 645 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 TPM3P06753 285 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 CCDC192P0DO97 292 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 ADD1P35611 737 aaKnown RBP25.72■■□□□ 1.71
RNF39-201ENST00000244360 PGBD1Q96JS3 809 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 DDX19AQ9NUU7 478 aaKnown RBP25.72■■□□□ 1.71
RNF39-201ENST00000244360 CFAP45Q9UL16 551 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 LAMB2P55268 1798 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 PRC1O43663 620 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 ITPK1Q13572 414 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 NCOA7Q8NI08 942 aa25.72■■□□□ 1.71
RNF39-201ENST00000244360 ZNF213O14771 459 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 ANTXR2P58335 489 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 RBM43Q6ZSC3 357 aaKnown RBP25.71■■□□□ 1.71
RNF39-201ENST00000244360 BARGINQ6ZT62 677 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 TCRBV5S4A2TA0A5A2 114 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 GOLGA6L4A6NEF3 574 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 MAP3K11Q16584 847 aa25.71■■□□□ 1.71
RNF39-201ENST00000244360 GPHNQ9NQX3 736 aaPredicted RBP25.71■■□□□ 1.71
RNF39-201ENST00000244360 CARMIL3Q8ND23 1372 aa25.7■■□□□ 1.7
RNF39-201ENST00000244360 PDE6AP16499 860 aa25.7■■□□□ 1.7
RNF39-201ENST00000244360 ATL3Q6DD88 541 aa25.7■■□□□ 1.7
RNF39-201ENST00000244360 ACSBG1Q96GR2 724 aa25.7■■□□□ 1.7
RNF39-201ENST00000244360 NBPF3Q9H094 633 aa25.7■■□□□ 1.7
RNF39-201ENST00000244360 MYH14Q7Z406 1995 aaKnown RBP25.7■■□□□ 1.7
RNF39-201ENST00000244360 SLC5A1P13866 664 aa25.69■■□□□ 1.7
RNF39-201ENST00000244360 DACT1Q9NYF0 836 aa25.69■■□□□ 1.7
RNF39-201ENST00000244360 ZNF532Q9HCE3 1301 aa25.69■■□□□ 1.7
RNF39-201ENST00000244360 MTERF4Q7Z6M4 381 aaKnown RBP25.69■■□□□ 1.7
RNF39-201ENST00000244360 CLSTN2Q9H4D0 955 aa25.69■■□□□ 1.7
RNF39-201ENST00000244360 MYO5AQ9Y4I1 1855 aaKnown RBP25.69■■□□□ 1.7
RNF39-201ENST00000244360 DOCK2Q92608 1830 aa25.69■■□□□ 1.7
RNF39-201ENST00000244360 IDH1O75874 414 aaKnown RBP25.68■■□□□ 1.7
RNF39-201ENST00000244360 NTSR2O95665 410 aa25.68■■□□□ 1.7
RNF39-201ENST00000244360 FDPSP14324 419 aaKnown RBP25.68■■□□□ 1.7
RNF39-201ENST00000244360 RALYLQ86SE5 291 aaKnown RBP25.68■■□□□ 1.7
RNF39-201ENST00000244360 HPS5Q9UPZ3 1129 aa25.68■■□□□ 1.7
RNF39-201ENST00000244360 HELBQ8NG08 1087 aaPredicted RBP25.68■■□□□ 1.7
RNF39-201ENST00000244360 RCOR1Q9UKL0 485 aa25.68■■□□□ 1.7
RNF39-201ENST00000244360 NAP1L2Q9ULW6 460 aaPredicted RBP25.68■■□□□ 1.7
RNF39-201ENST00000244360 WWC3Q9ULE0 1092 aa25.67■■□□□ 1.7
RNF39-201ENST00000244360 ZNF831Q5JPB2 1677 aa25.67■■□□□ 1.7
RNF39-201ENST00000244360 ZMYM6O95789 1325 aa25.67■■□□□ 1.7
RNF39-201ENST00000244360 COL5A3P25940 1745 aaPredicted RBP25.66■■□□□ 1.7
RNF39-201ENST00000244360 ALX1Q15699 326 aa25.66■■□□□ 1.7
RNF39-201ENST00000244360 CCDC152Q4G0S7 254 aa25.66■■□□□ 1.7
RNF39-201ENST00000244360 SPATA5Q8NB90 893 aa25.66■■□□□ 1.7
RNF39-201ENST00000244360 SEC31BQ9NQW1 1179 aa25.66■■□□□ 1.7
RNF39-201ENST00000244360 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
RNF39-201ENST00000244360 KLF18A0A0U1RQI7 1052 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 DHX16O60231 1041 aaKnown RBP25.65■■□□□ 1.7
RNF39-201ENST00000244360 SMARCC1Q92922 1105 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms