RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 INTS4Q96HW7 963 aaKnown RBP15.17■□□□□ 0.02
NEK4-201ENST00000233027 ZEB2O60315 1214 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 CCDC42Q96M95 316 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
NEK4-201ENST00000233027 FBF1Q8TES7 1133 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 DHX32Q7L7V1 743 aaKnown RBP15.16■□□□□ 0.02
NEK4-201ENST00000233027 U2AF2P26368 475 aaKnown RBP eCLIP15.16■□□□□ 0.02
NEK4-201ENST00000233027 CARD14Q9BXL6 1004 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 NSRP1Q9H0G5 558 aaKnown RBP15.16■□□□□ 0.02
NEK4-201ENST00000233027 CTNND2Q9UQB3 1225 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 COMMD10Q9Y6G5 202 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
NEK4-201ENST00000233027 ZNF622Q969S3 477 aaKnown RBP eCLIP15.16■□□□□ 0.02
NEK4-201ENST00000233027 RFC4P35249 363 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 C6orf163Q5TEZ5 329 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 SYNCQ9H7C4 482 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
NEK4-201ENST00000233027 MXRA7P84157 204 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
NEK4-201ENST00000233027 ACTN2P35609 894 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 G2E3Q7L622 706 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 GSTA5Q7RTV2 222 aa15.15■□□□□ 0.02
NEK4-201ENST00000233027 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 NEK11Q8NG66 645 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 GTPBP4Q9BZE4 634 aaKnown RBP15.14■□□□□ 0.01
NEK4-201ENST00000233027 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
NEK4-201ENST00000233027 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 BAG1Q99933 345 aaPredicted RBP15.14■□□□□ 0.01
NEK4-201ENST00000233027 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 JAG2Q9Y219 1238 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 OGFRQ9NZT2 677 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 PLS1Q14651 629 aa15.14■□□□□ 0.01
NEK4-201ENST00000233027 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 ZNF174Q15697 407 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 CCDC6Q16204 474 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 RPS6KB1P23443 525 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 CCDC121Q6ZUS5 278 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 BRAPQ7Z569 592 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 CCDC50Q8IVM0 306 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 EEF2P13639 858 aaKnown RBP15.13■□□□□ 0.01
NEK4-201ENST00000233027 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 EVCP57679 992 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 C6orf50Q9HD87 102 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 TNNI2P48788 182 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 TSNARE1Q96NA8 513 aa15.13■□□□□ 0.01
NEK4-201ENST00000233027 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
NEK4-201ENST00000233027 DENND4BO75064 1496 aaPredicted RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 GRIPAP1Q4V328 841 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 C10orf67Q8IYJ2 551 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 AKR1B15C9JRZ8 316 aaPredicted RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 SLC27A2O14975 620 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 TUBB4AP04350 444 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 CEP57Q86XR8 500 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 NGLY1Q96IV0 654 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 NIP7Q9Y221 180 aaKnown RBP eCLIP15.12■□□□□ 0.01
NEK4-201ENST00000233027 MAP3K5Q99683 1374 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 SMARCC2Q8TAQ2 1214 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 IQCGQ9H095 443 aaKnown RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 GNAQP50148 359 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 ST5P78524 1137 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
NEK4-201ENST00000233027 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 ABCC1P33527 1531 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 ELP1O95163 1332 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 MYL5Q02045 173 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 CCDC25Q86WR0 208 aa15.12■□□□□ 0.01
NEK4-201ENST00000233027 NUP160Q12769 1436 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 TLDC2A0PJX2 215 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 TESK2Q96S53 571 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 MCM9Q9NXL9 1143 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 ITSN2Q9NZM3 1697 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 CCDC122Q5T0U0 273 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 ANKS4BQ8N8V4 417 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
NEK4-201ENST00000233027 NCOA5Q9HCD5 579 aaKnown RBP15.11■□□□□ 0.01
NEK4-201ENST00000233027 PIK3C2GO75747 1445 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 DUOX2Q9NRD8 1548 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 TTC31Q49AM3 519 aaPredicted RBP15.11■□□□□ 0.01
NEK4-201ENST00000233027 KRT79Q5XKE5 535 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
NEK4-201ENST00000233027 FAM160A1Q05DH4 1040 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 A0A1W2PP64 1363 aa15.11■□□□□ 0.01
NEK4-201ENST00000233027 DPH6Q7L8W6 267 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms