RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MEIS3Q99687 375 aa17.81■□□□□ 0.44
GPN3-201ENST00000228827 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
GPN3-201ENST00000228827 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
GPN3-201ENST00000228827 RFX5P48382 616 aaPredicted RBP17.8■□□□□ 0.44
GPN3-201ENST00000228827 CTCFP49711 727 aaPredicted RBP17.8■□□□□ 0.44
GPN3-201ENST00000228827 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
GPN3-201ENST00000228827 VGLL2Q8N8G2 317 aa17.8■□□□□ 0.44
GPN3-201ENST00000228827 ARHGAP45Q92619 1136 aa17.8■□□□□ 0.44
GPN3-201ENST00000228827 IQSEC3Q9UPP2 1182 aaPredicted RBP17.8■□□□□ 0.44
GPN3-201ENST00000228827 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
GPN3-201ENST00000228827 PDE8BO95263 885 aa17.79■□□□□ 0.44
GPN3-201ENST00000228827 MMP14P50281 582 aa17.79■□□□□ 0.44
GPN3-201ENST00000228827 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
GPN3-201ENST00000228827 DLGAP5Q15398 846 aa17.79■□□□□ 0.44
GPN3-201ENST00000228827 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
GPN3-201ENST00000228827 SIL1Q9H173 461 aa17.79■□□□□ 0.44
GPN3-201ENST00000228827 PCDHAC2Q9Y5I4 1007 aa17.79■□□□□ 0.44
GPN3-201ENST00000228827 EYA2O00167 538 aa17.78■□□□□ 0.44
GPN3-201ENST00000228827 RGMBQ6NW40 437 aa17.78■□□□□ 0.44
GPN3-201ENST00000228827 TNS4Q8IZW8 715 aa17.78■□□□□ 0.44
GPN3-201ENST00000228827 ZBED3Q96IU2 234 aaPredicted RBP17.78■□□□□ 0.44
GPN3-201ENST00000228827 BEGAINQ9BUH8 593 aa17.78■□□□□ 0.44
GPN3-201ENST00000228827 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
GPN3-201ENST00000228827 TRIM27P14373 513 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 MAP2K2P36507 400 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 LBX1P52954 281 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 FKBP1AP62942 108 aaKnown RBP17.77■□□□□ 0.44
GPN3-201ENST00000228827 CHAF1AQ13111 956 aaPredicted RBP17.77■□□□□ 0.44
GPN3-201ENST00000228827 CFAP100Q494V2 611 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
GPN3-201ENST00000228827 FBXO33Q7Z6M2 555 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 ZIC5Q96T25 663 aa17.77■□□□□ 0.44
GPN3-201ENST00000228827 FAM205AQ6ZU69 1335 aa17.77■□□□□ 0.43
GPN3-201ENST00000228827 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
GPN3-201ENST00000228827 HSPA8P11142 646 aaKnown RBP17.76■□□□□ 0.43
GPN3-201ENST00000228827 BCAMP50895 628 aa17.76■□□□□ 0.43
GPN3-201ENST00000228827 ZNF157P51786 506 aaPredicted RBP17.76■□□□□ 0.43
GPN3-201ENST00000228827 RBM5P52756 815 aaKnown RBP eCLIP17.76■□□□□ 0.43
GPN3-201ENST00000228827 PUM3Q15397 648 aaKnown RBP17.76■□□□□ 0.43
GPN3-201ENST00000228827 MOB2Q70IA6 237 aa17.76■□□□□ 0.43
GPN3-201ENST00000228827 ATG9AQ7Z3C6 839 aa17.76■□□□□ 0.43
GPN3-201ENST00000228827 THSD7BQ9C0I4 1608 aa17.76■□□□□ 0.43
GPN3-201ENST00000228827 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 IFIT1P09914 478 aaKnown RBP17.75■□□□□ 0.43
GPN3-201ENST00000228827 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 TSKSQ9UJT2 592 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 PA2G4Q9UQ80 394 aaKnown RBP17.75■□□□□ 0.43
GPN3-201ENST00000228827 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 FGFR2P21802 821 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 NOGQ13253 232 aa17.75■□□□□ 0.43
GPN3-201ENST00000228827 TTLL12Q14166 644 aaPredicted RBP17.75■□□□□ 0.43
GPN3-201ENST00000228827 APOBEC3FQ8IUX4 373 aaKnown RBP17.75■□□□□ 0.43
GPN3-201ENST00000228827 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
GPN3-201ENST00000228827 AOX1Q06278 1338 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 FAM155AB1AL88 458 aaPredicted RBP17.74■□□□□ 0.43
GPN3-201ENST00000228827 UBE2Q2LH0YL09 131 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 GNAI3P08754 354 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 PRKG1Q13976 671 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 MTMR14Q8NCE2 650 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 PRMT6Q96LA8 375 aaPredicted RBP17.74■□□□□ 0.43
GPN3-201ENST00000228827 VEZTQ9HBM0 779 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
GPN3-201ENST00000228827 MYO1BO43795 1136 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 SLC5A1P13866 664 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 NF2P35240 595 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 GRIK5Q16478 980 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 LPIN2Q92539 896 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
GPN3-201ENST00000228827 CIAO1O76071 339 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 FKBP1BP68106 108 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 DEFB129Q9H1M3 183 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
GPN3-201ENST00000228827 SRGAP3O43295 1099 aa17.71■□□□□ 0.43
GPN3-201ENST00000228827 CAPN15O75808 1086 aa17.71■□□□□ 0.43
GPN3-201ENST00000228827 SLC10A3P09131 477 aa17.71■□□□□ 0.43
GPN3-201ENST00000228827 KIF23Q02241 960 aaPredicted RBP17.71■□□□□ 0.43
GPN3-201ENST00000228827 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
GPN3-201ENST00000228827 POLR2AP24928 1970 aaKnown RBP17.71■□□□□ 0.43
GPN3-201ENST00000228827 IL15P40933 162 aaPredicted RBP17.7■□□□□ 0.42
GPN3-201ENST00000228827 ATP2B3Q16720 1220 aa17.7■□□□□ 0.42
GPN3-201ENST00000228827 RASAL3Q86YV0 1011 aa17.7■□□□□ 0.42
GPN3-201ENST00000228827 SERPINA10Q9UK55 444 aa17.7■□□□□ 0.42
GPN3-201ENST00000228827 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
GPN3-201ENST00000228827 FZD1Q9UP38 647 aa17.7■□□□□ 0.42
GPN3-201ENST00000228827 CRKP46108 304 aa17.69■□□□□ 0.42
GPN3-201ENST00000228827 TBC1D22AQ8WUA7 517 aa17.69■□□□□ 0.42
GPN3-201ENST00000228827 TDRD3Q9H7E2 651 aaKnown RBP17.69■□□□□ 0.42
GPN3-201ENST00000228827 COPRSQ9NQ92 184 aa17.69■□□□□ 0.42
GPN3-201ENST00000228827 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.69■□□□□ 0.42
GPN3-201ENST00000228827 PAPPA2Q9BXP8 1791 aa17.69■□□□□ 0.42
GPN3-201ENST00000228827 GNAI2P04899 355 aa17.69■□□□□ 0.42
GPN3-201ENST00000228827 DZIP1LQ8IYY4 767 aaKnown RBP17.69■□□□□ 0.42
GPN3-201ENST00000228827 ZNF70Q9UC06 446 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms