RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 DPF2Q92785 391 aa16.67■□□□□ 0.26
PRDM4-201ENST00000228437 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 HDXQ7Z353 690 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 GPR161Q8N6U8 529 aaKnown RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 COPS6Q7L5N1 327 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 ZMYND10O75800 440 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 RDXP35241 583 aaKnown RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 CC2D1AQ6P1N0 951 aaPredicted RBP16.66■□□□□ 0.26
PRDM4-201ENST00000228437 WDR24Q96S15 920 aa16.66■□□□□ 0.26
PRDM4-201ENST00000228437 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 PRC1O43663 620 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 ANO1Q5XXA6 986 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 SARM1Q6SZW1 724 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 PHKBQ93100 1093 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 ADALQ6DHV7 355 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
PRDM4-201ENST00000228437 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 STAMQ92783 540 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 MYL10Q9BUA6 226 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 KIAA0754O94854 1291 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 RNF187Q5TA31 235 aaPredicted RBP16.65■□□□□ 0.26
PRDM4-201ENST00000228437 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 LCMT1Q9UIC8 334 aa16.65■□□□□ 0.26
PRDM4-201ENST00000228437 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
PRDM4-201ENST00000228437 GOLGA6L9A6NEM1 432 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 LIG3P49916 1009 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 CTAGE9A4FU28 777 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 SASH1O94885 1247 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 ACTN2P35609 894 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
PRDM4-201ENST00000228437 ATP2C2O75185 946 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
PRDM4-201ENST00000228437 AIFM3Q96NN9 605 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 ZNF213O14771 459 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 N4BP3O15049 544 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 GOLGA5Q8TBA6 731 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 QRICH2Q9H0J4 1663 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
PRDM4-201ENST00000228437 DACH1Q9UI36 760 aa16.63■□□□□ 0.25
PRDM4-201ENST00000228437 CCDC148Q8NFR7 591 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 METAP2P50579 478 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRDM4-201ENST00000228437 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 POLA2Q14181 598 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 TOGARAM2Q6ZUX3 1019 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 ZEB2O60315 1214 aa16.62■□□□□ 0.25
PRDM4-201ENST00000228437 IARSP41252 1262 aaKnown RBP16.61■□□□□ 0.25
PRDM4-201ENST00000228437 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 JADE2Q9NQC1 790 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 E7EWF7 191 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 GRAMD1CQ8IYS0 662 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 PAG1Q9NWQ8 432 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 KIF1BO60333 1816 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 SHTN1A0MZ66 631 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 TADA3O75528 432 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 MTF1Q14872 753 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 CEP112Q8N8E3 955 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
PRDM4-201ENST00000228437 LOC102724159A0A0B4J2E5 919 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 POLR2DO15514 142 aaKnown RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 H2AFXP16104 143 aaPredicted RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 PWP2Q15269 919 aaKnown RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 JRKLQ9Y4A0 524 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 SOWAHDA6NJG2 315 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 N4BP1O75113 896 aaKnown RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 VPS16Q9H269 839 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 KCNH3Q9ULD8 1083 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 PFKFB2O60825 505 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 TUBB4AP04350 444 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
PRDM4-201ENST00000228437 TNNI3KQ59H18 835 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms