RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 EXOC6Q8TAG9 804 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 CLEC11AQ9Y240 323 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 FPGT-TNNI3KV9GXZ4 949 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 MYO3BQ8WXR4 1341 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 SCN4AP35499 1836 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 USP17L8P0C7I0 530 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 TBC1D10BQ4KMP7 808 aaPredicted RBP18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 RBM26Q5T8P6 1007 aaKnown RBP18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 CCDC102BQ68D86 513 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 KIAA0825Q8IV33 1275 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 RBM46Q8TBY0 533 aaKnown RBP18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 TRPM4Q8TD43 1214 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 GNL3LQ9NVN8 582 aaKnown RBP18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 FAM205AQ6ZU69 1335 aa18.1■□□□□ 0.49
PCOLCE-201ENST00000223061 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 LDHDQ86WU2 507 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 GPR108Q9NPR9 543 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 F8W031 263 aaPredicted RBP18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 EGFRP00533 1210 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 MFSD14BQ5SR56 506 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 SMC1BQ8NDV3 1235 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 IL1RAPL2Q9NP60 686 aa18.09■□□□□ 0.49
PCOLCE-201ENST00000223061 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
PCOLCE-201ENST00000223061 OGFOD1Q8N543 542 aa18.08■□□□□ 0.48
PCOLCE-201ENST00000223061 RHPN1Q8TCX5 695 aa18.08■□□□□ 0.48
PCOLCE-201ENST00000223061 HIRAP54198 1017 aaPredicted RBP18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 ZNF280AP59817 542 aaPredicted RBP18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 KIF4BQ2VIQ3 1234 aa18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 DBNDD2Q9BQY9 259 aa18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 PSME4Q14997 1843 aa18.07■□□□□ 0.48
PCOLCE-201ENST00000223061 RAB11FIP3O75154 756 aa18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 FKBP1AP62942 108 aaKnown RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 EAF2Q96CJ1 260 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 MYOZ2Q9NPC6 264 aa18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 TLR7Q9NYK1 1049 aaKnown RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 MAP1SQ66K74 1059 aaPredicted RBP18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 AACSQ86V21 672 aa18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 HDAC9Q9UKV0 1011 aa18.06■□□□□ 0.48
PCOLCE-201ENST00000223061 FSTL1Q12841 308 aa18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 RASGRF1Q13972 1273 aa18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 ZNF646O15015 1829 aaPredicted RBP18.05■□□□□ 0.48
PCOLCE-201ENST00000223061 ARAP2Q8WZ64 1704 aa18.04■□□□□ 0.48
PCOLCE-201ENST00000223061 SEMA3EO15041 775 aa18.04■□□□□ 0.48
PCOLCE-201ENST00000223061 AAMPQ13685 434 aa18.04■□□□□ 0.48
PCOLCE-201ENST00000223061 GRIK5Q16478 980 aa18.04■□□□□ 0.48
PCOLCE-201ENST00000223061 CLASRPQ8N2M8 674 aaKnown RBP18.04■□□□□ 0.48
PCOLCE-201ENST00000223061 CCDC158Q5M9N0 1113 aa18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 WDR66Q8TBY9 1149 aa18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 DCTPP1Q9H773 170 aa18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 LRRCC1Q9C099 1032 aa18.03■□□□□ 0.48
PCOLCE-201ENST00000223061 ASTN2O75129 1339 aaPredicted RBP18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 UQCRFS1P1P0C7P4 283 aa18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 SCARF1Q14162 830 aa18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 CNTROBQ8N137 903 aa18.02■□□□□ 0.48
PCOLCE-201ENST00000223061 ADAMTSL1Q8N6G6 1762 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 IFIT2P09913 472 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 RBM5P52756 815 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 NBPF9Q3BBW0 867 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 SPATA5Q8NB90 893 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 ZC3H15Q8WU90 426 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 HMG20BQ9P0W2 317 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 MCAMP43121 646 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 MMP14P50281 582 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 DLGAP5Q15398 846 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 CFAP100Q494V2 611 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 SNRKQ9NRH2 765 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 GGA3Q9NZ52 723 aa18.01■□□□□ 0.47
PCOLCE-201ENST00000223061 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
PCOLCE-201ENST00000223061 ABCF2Q9UG63 623 aa18■□□□□ 0.47
PCOLCE-201ENST00000223061 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
PCOLCE-201ENST00000223061 WNT10BO00744 389 aa17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 PRDX5P30044 214 aa17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 ANGEL2Q5VTE6 544 aaKnown RBP17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 SUGT1Q9Y2Z0 365 aa17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 PDS5AQ29RF7 1337 aaKnown RBP17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 SALL1Q9NSC2 1324 aa17.99■□□□□ 0.47
PCOLCE-201ENST00000223061 ZBTB22O15209 634 aa17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 ITGBL1O95965 494 aaPredicted RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 CRKP46108 304 aa17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 DCPSQ96C86 337 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 TRAF5O00463 557 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms