RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 TPX2Q9ULW0 747 aaKnown RBP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 PRDM11Q9NQV5 511 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 ZBTB21Q9ULJ3 1066 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 STK38LQ9Y2H1 464 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 CUX1P39880 1505 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 INPP5BP32019 993 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 MUM1Q2TAK8 710 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 PDZD8Q8NEN9 1154 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 TTLL3Q9Y4R7 772 aa16.41■□□□□ 0.22
SPTLC2-201ENST00000216484 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 RAPGEF1Q13905 1077 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 EVI5LQ96CN4 794 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 RNASE9P60153 205 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 KCNG4Q8TDN1 519 aa16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-201ENST00000216484 WTAPQ15007 396 aa16.39■□□□□ 0.22
SPTLC2-201ENST00000216484 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.22
SPTLC2-201ENST00000216484 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 KIFAP3Q92845 792 aa16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 SPDYE3A6NKU9 549 aa16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 RABEP2Q9H5N1 569 aa16.39■□□□□ 0.21
SPTLC2-201ENST00000216484 SLC8A3P57103 927 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 TMTC4Q5T4D3 741 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 STX10O60499 249 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 GOLGA6CA6NDK9 693 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 GOLGA6DP0CG33 693 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 NACA2Q9H009 215 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 GOLGA6AQ9NYA3 693 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 VSIG1Q86XK7 387 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
SPTLC2-201ENST00000216484 SPOPO43791 374 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 NOC2LQ9Y3T9 749 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 MAN1A1P33908 653 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 PHEXP78562 749 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 NACADO15069 1562 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 ACTN4O43707 911 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 RFX1P22670 979 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 VPS41P49754 854 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 DHX58Q96C10 678 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 HAUS2Q9NVX0 235 aa16.37■□□□□ 0.21
SPTLC2-201ENST00000216484 HS2ST1Q7LGA3 356 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 ATP2A3Q93084 1043 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 SPDL1Q96EA4 605 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 NAPAP54920 295 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 HAUS8Q9BT25 410 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 CDR2Q01850 454 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 RTN1Q16799 776 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 CCT6AP40227 531 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 PPP2R3AQ06190 1150 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 WIZO95785 1651 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 RBBP5Q15291 538 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 GCKP35557 465 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 RASSF2P50749 326 aa16.36■□□□□ 0.21
SPTLC2-201ENST00000216484 SPAG1Q07617 926 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 IRX4P78413 519 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 ZBTB43O43298 467 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 PDCD2Q16342 344 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 NXNQ6DKJ4 435 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 MGARPQ8TDB4 240 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 UBL4BQ8N7F7 174 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 KRT3P12035 628 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms