RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 RPLP1P05386 114 aaKnown RBP6□□□□□ -1.45
CDKN3-201ENST00000216414 C8AP07357 584 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 PCSK2P16519 638 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 MAP4P27816 1152 aaKnown RBP6□□□□□ -1.45
CDKN3-201ENST00000216414 HOXA10P31260 410 aaPredicted RBP6□□□□□ -1.45
CDKN3-201ENST00000216414 C19orf57Q0VDD7 668 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 C8orf34Q49A92 452 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 SGO2Q562F6 1265 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 HGSNATQ68CP4 663 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 FBXL6Q8N531 539 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 TTC16Q8NEE8 873 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 GIMAP7Q8NHV1 300 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 HHIPQ96QV1 700 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 DZANK1Q9NVP4 752 aa6□□□□□ -1.45
CDKN3-201ENST00000216414 ANGEL1Q9UNK9 670 aaKnown RBP6□□□□□ -1.45
CDKN3-201ENST00000216414 ATP2B4P23634 1241 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 SRPK2P78362 688 aaKnown RBP5.99□□□□□ -1.45
CDKN3-201ENST00000216414 POU5F2Q8N7G0 328 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 USP26Q9BXU7 913 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 KRTAP4-2Q9BYR5 136 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 ATG3Q9NT62 314 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 PIM2Q9P1W9 311 aa5.99□□□□□ -1.45
CDKN3-201ENST00000216414 NUTM2GQ5VZR2 741 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 ABI1Q8IZP0 508 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 C12orf50Q8NA57 414 aaPredicted RBP5.98□□□□□ -1.45
CDKN3-201ENST00000216414 OSBPL1AQ9BXW6 950 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 GGNBP2Q9H3C7 697 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 SOX13Q9UN79 622 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 LEMD3Q9Y2U8 911 aa5.98□□□□□ -1.45
CDKN3-201ENST00000216414 MEGF11A6BM72 1044 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 IKBKEQ14164 716 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 NFKBIBQ15653 356 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 NOM1Q5C9Z4 860 aaKnown RBP5.97□□□□□ -1.45
CDKN3-201ENST00000216414 XKR5Q6UX68 686 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 TMEM102Q8N9M5 508 aaPredicted RBP5.97□□□□□ -1.45
CDKN3-201ENST00000216414 PMEPA1Q969W9 287 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 OSMRQ99650 979 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 CYP4F12Q9HCS2 524 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
CDKN3-201ENST00000216414 SOX1O00570 391 aaPredicted RBP5.96□□□□□ -1.46
CDKN3-201ENST00000216414 PDGFAP04085 211 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 F13BP05160 661 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 HELQQ8TDG4 1101 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 ASAP3Q8TDY4 903 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 BSNDQ8WZ55 320 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 ZKSCAN3Q9BRR0 538 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 CHRDQ9H2X0 955 aa5.96□□□□□ -1.46
CDKN3-201ENST00000216414 LOC100289279A0A1B0GTE1 492 aa5.95□□□□□ -1.46
CDKN3-201ENST00000216414 USP11P51784 963 aa5.95□□□□□ -1.46
CDKN3-201ENST00000216414 PAOXQ6QHF9 649 aa5.95□□□□□ -1.46
CDKN3-201ENST00000216414 NXPE3Q969Y0 559 aa5.95□□□□□ -1.46
CDKN3-201ENST00000216414 TMPRSS13Q9BYE2 586 aa5.95□□□□□ -1.46
CDKN3-201ENST00000216414 FAM95CA0A1B0GW59 222 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 EREGO14944 169 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 JUNBP17275 347 aaPredicted RBP5.94□□□□□ -1.46
CDKN3-201ENST00000216414 MPSTP25325 297 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 MZF1P28698 734 aaPredicted RBP5.94□□□□□ -1.46
CDKN3-201ENST00000216414 EIF1AXP47813 144 aaKnown RBP5.94□□□□□ -1.46
CDKN3-201ENST00000216414 AAMPQ13685 434 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 VN1R5Q7Z5H4 357 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 SMG8Q8ND04 991 aaKnown RBP5.94□□□□□ -1.46
CDKN3-201ENST00000216414 FBLIM1Q8WUP2 373 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 PBXIP1Q96AQ6 731 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
CDKN3-201ENST00000216414 PHACTR2O75167 634 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 TIAF1O95411 115 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 DRD2P14416 443 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 FOSL1P15407 271 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 GSTM4Q03013 218 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 MSMPQ1L6U9 139 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 CDPF1Q6NVV7 123 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 TP53INP2Q8IXH6 220 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 SHISA5Q8N114 240 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 TBC1D32Q96NH3 1257 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 SUGCTQ9HAC7 445 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 CCDC39Q9UFE4 941 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 POLIQ9UNA4 740 aa5.93□□□□□ -1.46
CDKN3-201ENST00000216414 DLGAP3O95886 979 aa5.92□□□□□ -1.46
CDKN3-201ENST00000216414 EDN3P14138 238 aa5.92□□□□□ -1.46
CDKN3-201ENST00000216414 CPSF6Q16630 551 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDKN3-201ENST00000216414 EXOSC6Q5RKV6 272 aaKnown RBP5.92□□□□□ -1.46
CDKN3-201ENST00000216414 METTL22Q9BUU2 404 aaPredicted RBP5.92□□□□□ -1.46
CDKN3-201ENST00000216414 CYP26A1O43174 497 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 TNFRSF21O75509 655 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 ESRRAP11474 423 aaPredicted RBP5.91□□□□□ -1.46
CDKN3-201ENST00000216414 MTMR3Q13615 1198 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 CBLL1Q75N03 491 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 VSIG10LQ86VR7 867 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 SNX29Q8TEQ0 813 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
CDKN3-201ENST00000216414 CCDC97Q96F63 343 aaPredicted RBP5.91□□□□□ -1.46
CDKN3-201ENST00000216414 YIPF2Q9BWQ6 316 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
CDKN3-201ENST00000216414 LATS2Q9NRM7 1088 aa5.91□□□□□ -1.46
CDKN3-201ENST00000216414 FOXD3Q9UJU5 478 aaPredicted RBP5.91□□□□□ -1.46
CDKN3-201ENST00000216414 ADMP35318 185 aa5.9□□□□□ -1.46
CDKN3-201ENST00000216414 SOX4Q06945 474 aaPredicted RBP5.9□□□□□ -1.46
CDKN3-201ENST00000216414 ALKBH2Q6NS38 261 aa5.9□□□□□ -1.46
CDKN3-201ENST00000216414 C2CD4AQ8NCU7 369 aaPredicted RBP5.9□□□□□ -1.46
CDKN3-201ENST00000216414 BHLHE41Q9C0J9 482 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms