RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CCDC85CA6NKD9 419 aa18.95■□□□□ 0.62
UPK3A-201ENST00000216211 NBPF7P0C2Y1 421 aaPredicted RBP18.95■□□□□ 0.62
UPK3A-201ENST00000216211 IL1R1P14778 569 aa18.95■□□□□ 0.62
UPK3A-201ENST00000216211 KAZALD1Q96I82 304 aa18.95■□□□□ 0.62
UPK3A-201ENST00000216211 JAG2Q9Y219 1238 aa18.95■□□□□ 0.62
UPK3A-201ENST00000216211 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
UPK3A-201ENST00000216211 NF2P35240 595 aa18.94■□□□□ 0.62
UPK3A-201ENST00000216211 DGKZQ13574 1117 aa18.94■□□□□ 0.62
UPK3A-201ENST00000216211 APOBEC3FQ8IUX4 373 aaKnown RBP18.94■□□□□ 0.62
UPK3A-201ENST00000216211 PUS3Q9BZE2 481 aaKnown RBP18.94■□□□□ 0.62
UPK3A-201ENST00000216211 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
UPK3A-201ENST00000216211 PRKG1Q13976 671 aa18.93■□□□□ 0.62
UPK3A-201ENST00000216211 DLGAP5Q15398 846 aa18.93■□□□□ 0.62
UPK3A-201ENST00000216211 E9PSI1 815 aa18.92■□□□□ 0.62
UPK3A-201ENST00000216211 BICC1Q9H694 974 aaKnown RBP18.92■□□□□ 0.62
UPK3A-201ENST00000216211 UTYO14607 1347 aa18.92■□□□□ 0.62
UPK3A-201ENST00000216211 FKBP1AP62942 108 aaKnown RBP18.91■□□□□ 0.62
UPK3A-201ENST00000216211 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
UPK3A-201ENST00000216211 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
UPK3A-201ENST00000216211 MTMR14Q8NCE2 650 aa18.91■□□□□ 0.62
UPK3A-201ENST00000216211 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
UPK3A-201ENST00000216211 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
UPK3A-201ENST00000216211 GYG1P46976 350 aa18.9■□□□□ 0.62
UPK3A-201ENST00000216211 UBE4AQ14139 1066 aa18.9■□□□□ 0.62
UPK3A-201ENST00000216211 FZD1Q9UP38 647 aa18.9■□□□□ 0.62
UPK3A-201ENST00000216211 PTPRCP08575 1304 aa18.9■□□□□ 0.62
UPK3A-201ENST00000216211 PTPN12Q05209 780 aaKnown RBP18.89■□□□□ 0.61
UPK3A-201ENST00000216211 SLFN5Q08AF3 891 aa18.89■□□□□ 0.61
UPK3A-201ENST00000216211 MKRN3Q13064 507 aaKnown RBP18.89■□□□□ 0.61
UPK3A-201ENST00000216211 RABL6Q3YEC7 729 aaPredicted RBP18.89■□□□□ 0.61
UPK3A-201ENST00000216211 ARMC9Q7Z3E5 817 aa18.89■□□□□ 0.61
UPK3A-201ENST00000216211 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
UPK3A-201ENST00000216211 DEFB129Q9H1M3 183 aa18.89■□□□□ 0.61
UPK3A-201ENST00000216211 RIPOR2Q9Y4F9 1068 aa18.89■□□□□ 0.61
UPK3A-201ENST00000216211 MYH13Q9UKX3 1938 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 HIBADHP31937 336 aaKnown RBP18.88■□□□□ 0.61
UPK3A-201ENST00000216211 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 TDRD7Q8NHU6 1098 aaKnown RBP18.88■□□□□ 0.61
UPK3A-201ENST00000216211 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 FAM84BQ96KN1 310 aaPredicted RBP18.88■□□□□ 0.61
UPK3A-201ENST00000216211 PRMT6Q96LA8 375 aaPredicted RBP18.88■□□□□ 0.61
UPK3A-201ENST00000216211 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
UPK3A-201ENST00000216211 AOX1Q06278 1338 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 FAM205AQ6ZU69 1335 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 SSC5DA1L4H1 1573 aa18.88■□□□□ 0.61
UPK3A-201ENST00000216211 MYO1BO43795 1136 aa18.87■□□□□ 0.61
UPK3A-201ENST00000216211 LAMB1P07942 1786 aa18.87■□□□□ 0.61
UPK3A-201ENST00000216211 RBM5P52756 815 aaKnown RBP eCLIP18.87■□□□□ 0.61
UPK3A-201ENST00000216211 VEZTQ9HBM0 779 aa18.87■□□□□ 0.61
UPK3A-201ENST00000216211 MFSD14BQ5SR56 506 aa18.86■□□□□ 0.61
UPK3A-201ENST00000216211 KLHDC4Q8TBB5 520 aa18.86■□□□□ 0.61
UPK3A-201ENST00000216211 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.86■□□□□ 0.61
UPK3A-201ENST00000216211 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
UPK3A-201ENST00000216211 OTOFQ9HC10 1997 aa18.86■□□□□ 0.61
UPK3A-201ENST00000216211 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
UPK3A-201ENST00000216211 TM4SF4P48230 202 aa18.85■□□□□ 0.61
UPK3A-201ENST00000216211 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
UPK3A-201ENST00000216211 LDLRAD1Q5T700 205 aa18.85■□□□□ 0.61
UPK3A-201ENST00000216211 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
UPK3A-201ENST00000216211 IQSEC3Q9UPP2 1182 aaPredicted RBP18.85■□□□□ 0.61
UPK3A-201ENST00000216211 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
UPK3A-201ENST00000216211 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
UPK3A-201ENST00000216211 MAP3K11Q16584 847 aa18.83■□□□□ 0.6
UPK3A-201ENST00000216211 NBPF12Q5TAG4 269 aaPredicted RBP18.83■□□□□ 0.6
UPK3A-201ENST00000216211 SPRYD7Q5W111 196 aa18.83■□□□□ 0.6
UPK3A-201ENST00000216211 VPS37DQ86XT2 251 aa18.83■□□□□ 0.6
UPK3A-201ENST00000216211 SMC4Q9NTJ3 1288 aa18.83■□□□□ 0.6
UPK3A-201ENST00000216211 PPP1R12BO60237 982 aaPredicted RBP18.82■□□□□ 0.6
UPK3A-201ENST00000216211 PDE8BO95263 885 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 RGS19P49795 217 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 SREBF2Q12772 1141 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
UPK3A-201ENST00000216211 FBXO33Q7Z6M2 555 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 CTU1Q7Z7A3 348 aaKnown RBP18.82■□□□□ 0.6
UPK3A-201ENST00000216211 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
UPK3A-201ENST00000216211 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
UPK3A-201ENST00000216211 RASA3Q14644 834 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 GRIK5Q16478 980 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 TRMT2AQ8IZ69 625 aaKnown RBP18.81■□□□□ 0.6
UPK3A-201ENST00000216211 ZNF296Q8WUU4 475 aaPredicted RBP18.81■□□□□ 0.6
UPK3A-201ENST00000216211 SLC10A4Q96EP9 437 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 CLMNQ96JQ2 1002 aa18.81■□□□□ 0.6
UPK3A-201ENST00000216211 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
UPK3A-201ENST00000216211 ZNF70Q9UC06 446 aaPredicted RBP18.81■□□□□ 0.6
UPK3A-201ENST00000216211 CRKP46108 304 aa18.8■□□□□ 0.6
UPK3A-201ENST00000216211 MLLT1Q03111 559 aaPredicted RBP18.8■□□□□ 0.6
UPK3A-201ENST00000216211 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
UPK3A-201ENST00000216211 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
UPK3A-201ENST00000216211 BCAMP50895 628 aa18.79■□□□□ 0.6
UPK3A-201ENST00000216211 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
UPK3A-201ENST00000216211 WNK4Q96J92 1243 aa18.79■□□□□ 0.6
UPK3A-201ENST00000216211 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms