RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Thsd7bQ6P4U0 1607 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 UncxO08934 530 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Stat5bP42232 786 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Siah1aP61092 282 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Spata18Q0P557 537 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Kif22Q3V300 660 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Fam228bQ497Q6 232 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Vps54Q5SPW0 977 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 CrkQ64010 304 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 LdhdQ7TNG8 484 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Tmem179Q8BHH9 233 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Kbtbd13Q8C828 458 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Sf3a1Q8K4Z5 791 aaKnown RBP13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Txnrd3Q99MD6 652 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Mroh6V9GX81 722 aa13.95□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Tuft1O08970 390 aa13.94□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Mctp2Q5RJH2 878 aa13.94□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Map3k12Q60700 888 aa13.94□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Pcdhb5Q91XZ5 792 aa13.94□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Hdac9Q99N13 588 aa13.94□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 TnksQ6PFX9 1320 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Cyp3a57D3YYZ0 503 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Arid4aF8VPQ2 1261 aaKnown RBP13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Zbtb7aO88939 569 aaKnown RBP13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Csrnp3P59055 597 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Ankrd13cQ3UX43 541 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Ltv1Q6NSQ7 470 aaKnown RBP13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Mboat7Q8CHK3 473 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Krt25Q8VCW2 446 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Eif2s2Q99L45 331 aaKnown RBP13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Sept12Q9D451 317 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Ripk4Q9ERK0 786 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Plagl1Q9JLQ4 704 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Trpm7Q923J1 1863 aa13.93□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Myh4Q5SX39 1939 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Cxcl9P18340 126 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 VegfbP49766 207 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Mmp14P53690 582 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Slc7a3P70423 618 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Znf692Q3U381 531 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Gxylt1Q3UHH8 404 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 SfswapQ3USH5 945 aaKnown RBP13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Znf219Q6IQX8 726 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Nme8Q715T0 586 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 RubcnQ80U62 956 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Fam160b2Q80YR2 744 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 ParnQ8VDG3 624 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 1700018B08RikQ9DA83 213 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 CarsQ9ER72 831 aaKnown RBP13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Ube3bQ9ES34 1070 aa13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Arfgef1G3X9K3 1846 aaKnown RBP13.92□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Nova2D3YVV7 556 aaKnown RBP13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Magea8O89012 320 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Cacnb3P54285 484 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Llgl2Q3TJ91 1027 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Nol8Q3UHX0 1147 aaKnown RBP13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Abhd15Q5F2F2 459 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 AsnsQ61024 561 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 VwdeQ6DFV8 926 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Bms1Q6PGF5 1284 aaKnown RBP13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Ankrd13aQ80UP5 588 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Socs7Q8VHQ2 579 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Taf5lQ91WQ5 589 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Riok1Q922Q2 567 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Chd5A2A8L1 1946 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Pcdh15Q99PJ1 1943 aa13.91□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Sik3Q6P4S6 1311 aa13.9□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Cdcp1Q5U462 833 aa13.9□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Mbd3Q9Z2D8 285 aaKnown RBP13.9□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Myh15E9Q264 1925 aa13.9□□□□□ -0.18
Ccdc28b-201ENSMUST00000030586 Klrg2Q3UM83 387 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Pla2g4fQ50L41 855 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Edrf1Q6GQV7 1239 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Ppil4Q9CXG3 492 aaKnown RBP13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Cdca7Q9D0M2 382 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Ddx20Q9JJY4 825 aaKnown RBP13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Epb41l3Q9WV92 929 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Adgra3Q7TT36 1310 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Tbc1d4Q8BYJ6 1307 aa13.89□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 AampJ3QN89 436 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Adam7O35227 789 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Prl7d1P04769 244 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 CnpP16330 420 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Tmprss11eQ5S248 423 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Map10Q8BJS7 891 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Tm4sf4Q91XD3 202 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Telo2Q9DC40 840 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Zcchc17Q9ESX4 241 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Bcar3Q9QZK2 820 aa13.88□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Krt24A1L317 512 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Grem2O88273 168 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 NpeppsQ11011 920 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Krt40Q6IFX3 439 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Golim4Q8BXA1 655 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Epc2Q8C0I4 808 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Hps4Q99KG7 671 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Borcs6Q9D6W8 360 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 FliiQ9JJ28 1271 aa13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Celf2Q9Z0H4 508 aaKnown RBP13.87□□□□□ -0.19
Ccdc28b-201ENSMUST00000030586 Npc1l1Q6T3U4 1333 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms