RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SNAPINO95295 136 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 H2AFB1P0C5Y9 115 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 SPP1P10451 314 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 PRDX4Q13162 271 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 MYPOPQ86VE0 399 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-223ENST00000641597 ABHD14AQ9BUJ0 271 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 PARPBPQ9NWS1 579 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 MTCH1Q9NZJ7 389 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 TRAV39A0A0B4J263 110 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 FAM24AA6NFZ4 105 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 H7C1Q1 480 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 HOXA6P31267 233 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 HERV-K104P61576 105 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 POLR2GP62487 172 aaKnown RBP eCLIP14.45□□□□□ -0.1
PHGDH-223ENST00000641597 C20orf204Q6ZNR8 217 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 RAB11FIP2Q7L804 512 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 UBALD2Q8IYN6 164 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 C17orf78Q8N4C9 275 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 C1QTNF5Q9BXJ0 243 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 PRELID3BQ9Y3B1 194 aa14.45□□□□□ -0.1
PHGDH-223ENST00000641597 COL27A1Q8IZC6 1860 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-223ENST00000641597 GTF3C1Q12789 2109 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 C9orf172C9J069 976 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 PRKACAP17612 351 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 IL32P24001 234 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 ECI1P42126 302 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 SWI5Q1ZZU3 235 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 OR10Z1Q8NGY1 313 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 CPNE4Q96A23 557 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-223ENST00000641597 GUCD1Q96NT3 240 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 ESRP2Q9H6T0 727 aaKnown RBP14.44□□□□□ -0.1
PHGDH-223ENST00000641597 E5RGE8 158 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 NDUFA2O43678 99 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 SERPINA7P05543 415 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 LHX2P50458 406 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 FAM76BQ5HYJ3 339 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 CXorf66Q5JRM2 361 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-223ENST00000641597 RIPPLY2Q5TAB7 128 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 ZNF818PQ6ZRF7 136 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 UBAC2Q8NBM4 344 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 UBALD1Q8TB05 177 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 CLCC1Q96S66 551 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 NDRG3Q9UGV2 375 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 NSG2Q9Y328 171 aa14.44□□□□□ -0.1
PHGDH-223ENST00000641597 IGKV1-6A0A0C4DH72 117 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 C3orf85A0A1B0GTC6 90 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 HSD17B6O14756 317 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 FLI1Q01543 452 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-223ENST00000641597 IZUMO4Q1ZYL8 232 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ZNF528Q3MIS6 628 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 EIF5AL1Q6IS14 154 aaKnown RBP14.43□□□□□ -0.1
PHGDH-223ENST00000641597 TBC1D26Q86UD7 250 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 OR2M7Q8NG81 312 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 NEK7Q8TDX7 302 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ISOC2Q96AB3 205 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 IP6K3Q96PC2 410 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ZNF703Q9H7S9 590 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-223ENST00000641597 PARP11Q9NR21 331 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ZNF732B4DXR9 585 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 MPPED1O15442 326 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 YKT6O15498 198 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 GAPDHP04406 335 aaKnown RBP14.43□□□□□ -0.1
PHGDH-223ENST00000641597 GLP1RP43220 463 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 CLDN18P56856 261 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 PCBD1P61457 104 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 SPATA46Q5T0L3 261 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 C1orf210Q8IVY1 113 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ZNF100Q8IYN0 542 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 LINC00518Q8N0U6 118 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 GAPTQ8N292 157 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 SCRT1Q9BWW7 348 aa14.43□□□□□ -0.1
PHGDH-223ENST00000641597 ARGFXA6NJG6 315 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 HS3ST1O14792 307 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 TSPAN15O95858 294 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 PRH1P02810 166 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 PPP1CCP36873 323 aaKnown RBP14.42□□□□□ -0.1
PHGDH-223ENST00000641597 SSPNQ14714 243 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 PEAR1Q5VY43 1037 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-223ENST00000641597 TMEM182Q6ZP80 229 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-223ENST00000641597 LGI3Q8N145 548 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 CCDC54Q8NEL0 328 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 SPSB4Q96A44 273 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 RSRP1Q9BUV0 290 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 SUCNR1Q9BXA5 334 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 ZFP57Q9NU63 452 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 IL36GQ9NZH8 169 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 FBXO7Q9Y3I1 522 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 PQLC2LA1A4F0 135 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 COLCA1Q6ZS62 124 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 RDH5Q92781 318 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 REPIN1Q9BWE0 567 aaKnown RBP14.42□□□□□ -0.1
PHGDH-223ENST00000641597 RGCCQ9H4X1 137 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 C12orf49Q9H741 205 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 PLEKHA2Q9HB19 425 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 CCL28Q9NRJ3 127 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 CACFD1Q9UGQ2 172 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 DMXL1Q9Y485 3027 aa14.42□□□□□ -0.1
PHGDH-223ENST00000641597 IGSF23A1L1A6 192 aa14.41□□□□□ -0.1
PHGDH-223ENST00000641597 CDRT15L2A8MXV6 281 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms