RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CLPXO76031 633 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 IL18Q14116 193 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 PDCD1Q15116 288 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 CRIP3Q6Q6R5 217 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 SUMF2Q8NBJ7 301 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 Q8NFD4 153 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 OR5H6Q8NGV6 325 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 SETD6Q8TBK2 473 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 NICN1Q9BSH3 213 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 SSBP3Q9BWW4 388 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-218ENST00000641491 SLIRPQ9GZT3 109 aaKnown RBP10.83□□□□□ -0.68
PHGDH-218ENST00000641491 CHST6Q9GZX3 395 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 LPAR5Q9H1C0 372 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 PATZ1Q9HBE1 687 aaKnown RBP10.83□□□□□ -0.68
PHGDH-218ENST00000641491 IL36RNQ9UBH0 155 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 DCHS2Q6V1P9 2916 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 NIPBLQ6KC79 2804 aaeCLIP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 IGKV1D-17A0A075B6S4 117 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 TRAV18A0A075B6X5 111 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 TMEM30CPA0ZSE6 113 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 SERPINE3A8MV23 424 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 SLC33A1O00400 549 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 MGST3O14880 152 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 FOXH1O75593 365 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 GLAP06280 429 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 EFNB2P52799 333 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 QRFPP83859 136 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 KRBOX4Q5JUW0 171 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 ATPAF1Q5TC12 328 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 ZNF788Q6ZQV5 615 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 CMTM4Q8IZR5 234 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 OR8H2Q8N162 312 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 SDSLQ96GA7 329 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 C1orf147Q96MC9 270 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 GAFA1Q96PS6 74 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 NUDT16L1Q9BRJ7 211 aaKnown RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 ABCG5Q9H222 651 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 RIMS4Q9H426 269 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-218ENST00000641491 IFT22Q9H7X7 185 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 IFT46Q9NQC8 304 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 FBN3Q75N90 2809 aa10.82□□□□□ -0.68
PHGDH-218ENST00000641491 TRGV10A0A0A0MS01 117 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 hCG_1809904A0A1W2PP81 198 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 A0A1W2PPE2 198 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 A0A1W2PR64 198 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 A0A1W2PRV1 198 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 UBE2QL1A1L167 161 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 FABP12A6NFH5 140 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 DVL1O14640 695 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 LDLRAD4O15165 306 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 XRCC3O43542 346 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 CA11O75493 328 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 ECDO95905 644 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 TK1P04183 234 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 EIF4EP06730 217 aaKnown RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 HIST1H1DP16402 221 aaKnown RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 CDK2P24941 298 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 INPP1P49441 399 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 HOXA4Q00056 320 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 BTNL3Q6UXE8 466 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 LAX1Q8IWV1 398 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 FAM185AQ8N0U4 392 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 BPIFB2Q8N4F0 458 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 CD177Q8N6Q3 437 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 ZNRF1Q8ND25 227 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 ARHGAP5-AS1Q96IT6 56 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 CMSS1Q9BQ75 279 aaKnown RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 SEBOXQ9HB31 216 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-218ENST00000641491 KAAG1Q9UBP8 84 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
PHGDH-218ENST00000641491 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 MEIKINA0A087WXM9 373 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 TRBV23-1A0A0A0MS06 115 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 hADV38S2A0JD32 116 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 K7N7A8 449 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 CTDSP2O14595 271 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 SOCS1O15524 211 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 IGHV2-5P01817 119 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 GNB3P16520 340 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 ELK1P19419 428 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 GLP1RP43220 463 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 TAS2R20P59543 309 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 PNLIPRP3Q17RR3 467 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 CDNFQ49AH0 187 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 C6orf183Q5T699 404 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 CNIH2Q6PI25 160 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 TRAT1Q6PIZ9 186 aa10.8□□□□□ -0.68
PHGDH-218ENST00000641491 MOB1BQ7L9L4 216 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms