RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GAPDHP04406 335 aaKnown RBP12.61□□□□□ -0.39
SCARB2-221ENST00000640341 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-221ENST00000640341 EXT1Q16394 746 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 Q6ZPA2 131 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF488Q96MN9 340 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 CALHM2Q9HA72 323 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 CACNA1DQ01668 2161 aa12.61□□□□□ -0.39
SCARB2-221ENST00000640341 WRBO00258 174 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 HS3ST1O14792 307 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 ADAM20O43506 726 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 DANCRP0C864 163 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 CLDN15P56746 228 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 CCL20P78556 96 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 EWSR1Q01844 656 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCARB2-221ENST00000640341 SPINK14Q6IE38 97 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 OR51H1Q8NH63 302 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 EXTL1Q92935 676 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
SCARB2-221ENST00000640341 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 C5orf49A4QMS7 147 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 RRP8O43159 456 aaKnown RBP12.6□□□□□ -0.39
SCARB2-221ENST00000640341 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-221ENST00000640341 BCL3P20749 454 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 P2RY1P47900 373 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 MYPOPQ86VE0 399 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-221ENST00000640341 RDH5Q92781 318 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 SUCNR1Q9BXA5 334 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 NIT2Q9NQR4 276 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 KIAA2026Q5HYC2 2103 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 FUT3P21217 361 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 OR2C3Q8N628 320 aa12.6□□□□□ -0.39
SCARB2-221ENST00000640341 GJE1A6NN92 205 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF727A8MUV8 499 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 MPPED1O15442 326 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 SULT1A1P50225 295 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 FOXG1P55316 489 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-221ENST00000640341 STARD6P59095 220 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 TLE1Q04724 770 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 GAPTQ8N292 157 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
SCARB2-221ENST00000640341 OR5C1Q8NGR4 320 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 NTNG2Q96CW9 530 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 EDN3P14138 238 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 DTYMKP23919 212 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 FUT6P51993 359 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 RBM11P57052 281 aaKnown RBP12.59□□□□□ -0.39
SCARB2-221ENST00000640341 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 SUMF2Q8NBJ7 301 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 TK1P04183 234 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-221ENST00000640341 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 HSF4Q9ULV5 492 aa12.59□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 FAM157AC9JC47 383 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 MRPL33O75394 65 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 PDGFBP01127 241 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 SEC11BP0C7V7 166 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 DPPA2Q7Z7J5 298 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 NOSIPQ9Y314 301 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 hCG_38984A0A1B0GV85 526 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 CST2P09228 141 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 MLF1P58340 268 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF239Q16600 458 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 MOB3AQ96BX8 217 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 GALNT14Q96FL9 552 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 PRRG4Q9BZD6 226 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 IFT22Q9H7X7 185 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 GPR35Q9HC97 309 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 CCL28Q9NRJ3 127 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 KLF2Q9Y5W3 355 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 PTPRZ1P23471 2315 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 FAM166BA8MTA8 275 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 PRSS44E7EML9 344 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 H7C1Q1 480 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 IL11RAQ14626 422 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 INTS12Q96CB8 462 aaKnown RBP12.58□□□□□ -0.4
SCARB2-221ENST00000640341 C10orf35Q96D05 121 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms