RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ADAP1O75689 374 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 OR52L2PQ8NGH6 319 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 COA4Q9NYJ1 87 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 CST2P09228 141 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 INHBBP09529 407 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 HIST1H3AP68431 136 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 RNF212Q495C1 297 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 PRSS42Q7Z5A4 293 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 UCN2Q96RP3 112 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 TINAGQ9UJW2 476 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 KIAA1324LA8MWY0 1029 aaPredicted RBP12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 GAB4Q2WGN9 574 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
HNRNPU-226ENST00000640218 ZAR1Q86SH2 424 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 R3HDM4Q96D70 268 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 MAP6Q96JE9 813 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 MAP1BP46821 2468 aaKnown RBP12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 OGG1O15527 345 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 HIKESHIQ53FT3 197 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 SLC35B3Q9H1N7 401 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 SLC52A3Q9NQ40 469 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 C21orf140B9A014 251 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 C11orf91Q3C1V1 193 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 MMP24Q9Y5R2 645 aa12.96□□□□□ -0.33
HNRNPU-226ENST00000640218 A0A1W2PPV9 198 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 SLC6A1P30531 599 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 LGALS7P47929 136 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 RAG2P55895 527 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 GATCO43716 136 aaKnown RBP12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 MMP7P09237 267 aaPredicted RBP12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 RBM14Q96PK6 669 aaKnown RBP12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 VPS25Q9BRG1 176 aa12.96□□□□□ -0.34
HNRNPU-226ENST00000640218 NEURL1O76050 574 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 C1QAP02745 245 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 COL19A1Q14993 1142 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 SLC25A30Q5SVS4 291 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 LSMEM1Q8N8F7 131 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 NEURL2Q9BR09 285 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 TOLLIPQ9H0E2 274 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 HTR1DP28221 377 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 SCGB1C2P0DMR2 95 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 TMEM33P57088 247 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 ATP6V1FQ16864 119 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 FAHD2BQ6P2I3 314 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 SFTPA2Q8IWL1 248 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 FAHD2AQ96GK7 314 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 OR2H1Q9GZK4 316 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 CTSDP07339 412 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 GPR35Q9HC97 309 aa12.95□□□□□ -0.34
HNRNPU-226ENST00000640218 NHLH1Q02575 133 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 NHLH2Q02577 135 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 NTMQ9P121 344 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 FCN1O00602 326 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 PMELP40967 661 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 TOMM20LQ6UXN7 152 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 CLDN34H7C241 214 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 RANP62826 216 aaKnown RBP12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 F2RL2O00254 374 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 SMRP1Q8NCR6 262 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 OR2M3Q8NG83 312 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 PAPPAQ13219 1627 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 BRS3P32247 399 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 RPS4Y2Q8TD47 263 aa12.94□□□□□ -0.34
HNRNPU-226ENST00000640218 TRIP12Q14669 1992 aaPredicted RBP12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 IGHV3OR15-7A0A075B7D8 119 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 OR5AL1P0C617 328 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 CAMPP49913 170 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 UBE2L3P68036 154 aaKnown RBP12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 CLEC18BQ6UXF7 455 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 GAPTQ8N292 157 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 VSTM2AQ8TAG5 236 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 ZNF764Q96H86 408 aaPredicted RBP12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 DUSP15Q9H1R2 295 aaPredicted RBP12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 SPCS3P61009 180 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■■□ 20.5
HNRNPU-226ENST00000640218 PDPNQ86YL7 162 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 RASL11BQ9BPW5 248 aa12.93□□□□□ -0.34
HNRNPU-226ENST00000640218 CHST1O43916 411 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms