RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TMEM239Q8WW34 195 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 C22orf15Q8WYQ4 148 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 TMIGD2Q96BF3 282 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 FMC1Q96HJ9 113 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 PKMYT1Q99640 499 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 BEX2Q9BXY8 128 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 GOLPH3Q9H4A6 298 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 POMKQ9H5K3 350 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 SLC22A14Q9Y267 594 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 ZNF706Q9Y5V0 76 aaPredicted RBP1.66□□□□□ -2.14
CCDC7-216ENST00000640058 DOCK6Q96HP0 2047 aa1.66□□□□□ -2.14
CCDC7-216ENST00000640058 LOC100506127A0A0U1RQW1 187 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 RAB19A4D1S5 217 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 PGPA6NDG6 321 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 MYO1DO94832 1006 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CA2P00918 260 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 IGHV3-53P01767 116 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CGB3P0DN86 165 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CGB7P0DN87 165 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CD151P48509 253 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 HADHBP55084 474 aaKnown RBP1.65□□□□□ -2.15
CCDC7-216ENST00000640058 FOXA1P55317 472 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 C1QTNF8P60827 252 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 TSPAN5P62079 268 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 VSNL1P62760 191 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 BIKQ13323 160 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 GPR176Q14439 515 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 SLC9A3R2Q15599 337 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 TMEM241Q24JQ0 296 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CEACAM21Q3KPI0 293 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 Q3ZCU0 254 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 PDZD11Q5EBL8 140 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 UBE2NLQ5JXB2 153 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 AMMECR1LQ6DCA0 310 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF773Q6PK81 442 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 TMEM25Q86YD3 366 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 AMN1Q8IY45 258 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 TRIML2Q8N7C3 387 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 ACBD4Q8NC06 268 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 OR2AE1Q8NHA4 323 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CLHC1Q8NHS4 586 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 OR5P2Q8WZ92 322 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 ITFG2Q969R8 447 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 FXYD5Q96DB9 178 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 TXNIPQ9H3M7 391 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 METTL8Q9H825 291 aaKnown RBP1.65□□□□□ -2.15
CCDC7-216ENST00000640058 AGPAT3Q9NRZ7 376 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 CFAP45Q9UL16 551 aa1.65□□□□□ -2.15
CCDC7-216ENST00000640058 PIK3R4Q99570 1358 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF879B4DU55 563 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 F8VP50 259 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 TCF21O43680 179 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ENSAO43768 121 aaKnown RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 PDCD6O75340 191 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 E2F6O75461 281 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 CPSF4O95639 269 aaKnown RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 TPM1P09493 284 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 GIMD1P0DJR0 217 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 IL12BP29460 328 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 TSPOP30536 169 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 GZMMP51124 257 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 TNNC1P63316 161 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 BNIP2Q12982 314 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ACTBL2Q562R1 376 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF660Q6AZW8 331 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 HBMQ6B0K9 141 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ERICH5Q6P6B1 374 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 USP50Q70EL3 339 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 SSX6Q7RTT6 188 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 DPPA2Q7Z7J5 298 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ZIC4Q8N9L1 334 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 OR8G5Q8NG78 346 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 NELFBQ8WX92 580 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 RBPMSQ93062 196 aaKnown RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 ZMYND19Q96E35 227 aaPredicted RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 PYURFQ96I23 114 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 SUCNR1Q9BXA5 334 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 MFSD1Q9H3U5 465 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 DIABLOQ9NR28 239 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 MRM2Q9UI43 246 aaKnown RBP1.64□□□□□ -2.15
CCDC7-216ENST00000640058 POFUT2Q9Y2G5 429 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 STK38LQ9Y2H1 464 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 USH1CQ9Y6N9 552 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 MYO9BQ13459 2157 aa1.64□□□□□ -2.15
CCDC7-216ENST00000640058 A0A1B0GW15 77 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 ZNF729A6NN14 1252 aaPredicted RBP1.63□□□□□ -2.15
CCDC7-216ENST00000640058 A8MWP4 228 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 D6RAR5 112 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 F5H5P2 479 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 RGS5O15539 181 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 NEMFO60524 1076 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 HLA-AP01891 365 aaKnown RBP1.63□□□□□ -2.15
CCDC7-216ENST00000640058 TRGV3P03979 118 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 IGKV5-2P06315 115 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 SOD3P08294 240 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 SLC2A1P11166 492 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 PRTN3P24158 256 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 PLTPP55058 493 aa1.63□□□□□ -2.15
CCDC7-216ENST00000640058 CCL23P55773 120 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms