RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 HSPB6O14558 160 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 MGST3O14880 152 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 UCHL1P09936 223 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 FABP5Q01469 135 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 SLC22A6Q4U2R8 563 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 SPARTQ8N0X7 666 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.8■□□□□ 0.44
SCN1B-206ENST00000638536 C19orf24Q9BVV8 132 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 MRPS28Q9Y2Q9 187 aaKnown RBP17.8■□□□□ 0.44
SCN1B-206ENST00000638536 DNAJC9-AS1A6NH13 148 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 SRMP19623 302 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 GLIPR1P48060 266 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 GLIPR1L1Q6UWM5 242 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 ZNF782Q6ZMW2 699 aaPredicted RBP17.8■□□□□ 0.44
SCN1B-206ENST00000638536 ZNF367Q7RTV3 350 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 COQ2Q96H96 371 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 CYYR1Q96J86 154 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 ST3GAL6Q9Y274 331 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 C17orf98A8MV24 154 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 BPIFB3P59826 476 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 BAMBIQ13145 260 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 BLMHQ13867 455 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 ATXN7L3Q14CW9 347 aaPredicted RBP17.79■□□□□ 0.44
SCN1B-206ENST00000638536 HSD17B12Q53GQ0 312 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 OSR2Q8N2R0 312 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 C17orf50Q8WW18 174 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 GFI1Q99684 422 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 PRDM13Q9H4Q3 707 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 TCF7L1Q9HCS4 588 aa17.79■□□□□ 0.44
SCN1B-206ENST00000638536 GEMIN2O14893 280 aaKnown RBP17.78■□□□□ 0.44
SCN1B-206ENST00000638536 P2RX3P56373 397 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 RBM11P57052 281 aaKnown RBP17.78■□□□□ 0.44
SCN1B-206ENST00000638536 UBA52P62987 128 aaKnown RBP17.78■□□□□ 0.44
SCN1B-206ENST00000638536 IL13RA2Q14627 380 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 RBMS3Q6XE24 437 aaKnown RBP17.78■□□□□ 0.44
SCN1B-206ENST00000638536 TBC1D15Q8TC07 691 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 THRSPQ92748 146 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 S100A13Q99584 98 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 YTHDF1Q9BYJ9 559 aaKnown RBP17.78■□□□□ 0.44
SCN1B-206ENST00000638536 LRRC42Q9Y546 428 aa17.78■□□□□ 0.44
SCN1B-206ENST00000638536 CSTBP04080 98 aaKnown RBP17.77■□□□□ 0.44
SCN1B-206ENST00000638536 ZNF728P0DKX0 622 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 ERP29P30040 261 aaKnown RBP17.77■□□□□ 0.44
SCN1B-206ENST00000638536 BMXP51813 675 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 MEF2CQ06413 473 aaPredicted RBP17.77■□□□□ 0.44
SCN1B-206ENST00000638536 SLC9A3R2Q15599 337 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 AWAT2Q6E213 333 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 CDH26Q8IXH8 852 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 CHST4Q8NCG5 386 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 TMEM104Q8NE00 496 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 TAF15Q92804 592 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCN1B-206ENST00000638536 BANF2Q9H503 90 aa17.77■□□□□ 0.44
SCN1B-206ENST00000638536 NPFFO15130 113 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 HOXA3O43365 443 aaPredicted RBP17.76■□□□□ 0.43
SCN1B-206ENST00000638536 MRPS14O60783 128 aaKnown RBP17.76■□□□□ 0.43
SCN1B-206ENST00000638536 MMP23AO75900 390 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 PAX6P26367 422 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 UBE2E1P51965 193 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 NHLRC3Q5JS37 347 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 BRICD5Q6PL45 260 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 NKAIN3Q8N8D7 197 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 PPP1R35Q8TAP8 253 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 PLPPR1Q8TBJ4 325 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 AJUBAQ96IF1 538 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 LINC00312Q9Y6C7 94 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 A0A1W2PPH5 198 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 hADV38S2A0JD32 116 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 CSN2P05814 226 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 GABRA5P31644 462 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 SAA4P35542 130 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 GUCA2AQ02747 115 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 TAF9Q16594 264 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 PAN3Q58A45 887 aaKnown RBP17.76■□□□□ 0.43
SCN1B-206ENST00000638536 KRBOX4Q5JUW0 171 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 UBE2UQ5VVX9 321 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 BAIAP2L2Q6UXY1 529 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 Q6YL49 198 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 PHYHIPQ92561 330 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 ZNF714Q96N38 554 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 JMJD8Q96S16 334 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 KCNK15Q9H427 330 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 TNFRSF19Q9NS68 423 aa17.76■□□□□ 0.43
SCN1B-206ENST00000638536 MEGF11A6BM72 1044 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 OR7C1O76099 320 aaPredicted RBP17.75■□□□□ 0.43
SCN1B-206ENST00000638536 MELTFP08582 738 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 CD37P11049 281 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 COX7A1P24310 79 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 NCR3LG1Q68D85 454 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 SVOPQ8N4V2 548 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 SUMF2Q8NBJ7 301 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 ZDHHC16Q969W1 377 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 UQCC2Q9BRT2 126 aa17.75■□□□□ 0.43
SCN1B-206ENST00000638536 ODAMA1E959 279 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 MEIOCA2RUB1 952 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 TRIM77I1YAP6 450 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 ZNF780AO75290 641 aaPredicted RBP17.74■□□□□ 0.43
SCN1B-206ENST00000638536 IGHV1-8P0DP01 117 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 GTF2F2P13984 249 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 TRAM1Q15629 374 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 OR10K2Q6IF99 312 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms