RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	P4HA3	Q7Z4N8	544 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	ZNF283	Q8N7M2	679 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	HAS2	Q92819	552 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	RBMXL1	Q96E39	390 aa	Known RBP	11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	LIME1	Q9H400	295 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	KLHL13	Q9P2N7	655 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	NXT1	Q9UKK6	140 aa	Known RBP	11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	B3GALT1	Q9Y5Z6	326 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	LHFPL6	Q9Y693	200 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	TSPAN2	O60636	221 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	FUT3	P21217	361 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	ZNF41	P51814	821 aa	Predicted RBP	11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	RND2	P52198	227 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	SRY	Q05066	204 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	OR5L1	Q8NGL2	311 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	CLDND2	Q8NHS1	167 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	SLC7A11	Q9UPY5	501 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	DBH	P09172	617 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	OTX2	P32243	289 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	CHST11	Q9NPF2	352 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	NECAP2	Q9NVZ3	263 aa		11.9	□□□□□ -0.5
KCNMA1-238	ENST00000638514	NPIPB13	A6NJU9	1138 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	NPIPB4	C9JG80	1138 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	IGHV3-9	P01782	118 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	HBE1	P02100	147 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	MDK	P21741	143 aa	Predicted RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CCL1	P22362	96 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ANOS1	P23352	680 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OMG	P23515	440 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ALDH3B1	P43353	468 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CAPZB	P47756	277 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	NOVA1	P51513	510 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	MRPS11	P82912	194 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	DMRTA1	Q5VZB9	504 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	GABRG3	Q99928	467 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	IGSF23	A1L1A6	192 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	SLC33A1	O00400	549 aa	Predicted RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	AMBP	P02760	352 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	DCAF7	P61962	342 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OR4D5	Q8NGN0	318 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	MSI2	Q96DH6	328 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OR51B6	Q9H340	312 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	GDF9	O60383	454 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ZNF205	O95201	554 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	IGKV3-11	P04433	115 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	MMP7	P09237	267 aa	Predicted RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CXCL12	P48061	93 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	POC1B	Q8TC44	478 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ZNF721	Q8TF20	911 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	RBM24	Q9BX46	236 aa	Known RBP	11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	SLC2A9	Q9NRM0	540 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	TMEM242	Q9NWH2	141 aa		11.89	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CYB5R3	P00387	301 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	PGA3	P0DJD8	388 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ZNF133	P52736	654 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CLRN1	P58418	232 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	GABRE	P78334	506 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	TLE4	Q04727	773 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	THEM4	Q5T1C6	240 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	TMEM234	Q8WY98	164 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	SYT3	Q9BQG1	590 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	RARRES3	Q9UL19	164 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	LAMA1	P25391	3075 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	IGHV3-15	A0A0B4J1V0	119 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514		M0R143	59 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	PHF1	O43189	567 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	SCRG1	O75711	98 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	DDAH2	O95865	285 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	FCGR2A	P12318	317 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	RAB11A	P62491	216 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	PNRC1	Q12796	327 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	SP5	Q6BEB4	398 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	LIN37	Q96GY3	246 aa	Predicted RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CABLES2	Q9BTV7	478 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	TRBV24-1	A0A075B6N3	115 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	DFFB	O76075	338 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OR4A8	P0C604	315 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OPRM1	P35372	400 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	COTL1	Q14019	142 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CMTM1	Q8IZ96	169 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OR10G4	Q8NGN3	311 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	NEK7	Q8TDX7	302 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	PLEKHF2	Q9H8W4	249 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	FBRS	Q9HAH7	460 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CDH20	Q9HBT6	801 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514	HS3ST3A1	Q9Y663	406 aa		11.88	□□□□□ -0.51
KCNMA1-238	ENST00000638514		A0A1B0GU03	582 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	LOC102723971	A0A1B0GUV8	181 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	ZNF732	B4DXR9	585 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	PNLIP	P16233	465 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	RRAD	P55042	308 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	CRIP3	Q6Q6R5	217 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	C9orf40	Q8IXQ3	194 aa		11.87	□□□□□ -0.51
KCNMA1-238	ENST00000638514	OR1P1	Q8NH06	330 aa		11.87	□□□□□ -0.51

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