RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 FAM221AA4D161 298 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 CLEC18AA5D8T8 446 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 KLF7O75840 302 aaPredicted RBP12.55□□□□□ -0.4
CLN6-215ENST00000636674 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
CLN6-215ENST00000636674 NTF4P34130 210 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 PPP1CCP36873 323 aaKnown RBP12.55□□□□□ -0.4
CLN6-215ENST00000636674 TMEM182Q6ZP80 229 aaPredicted RBP12.55□□□□□ -0.4
CLN6-215ENST00000636674 GGNQ86UU5 652 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 CLEC18CQ8NCF0 446 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 AKR7LQ8NHP1 331 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 YPEL4Q96NS1 127 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 FOXB1Q99853 325 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 HIPK2Q9H2X6 1198 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 FAM86C1Q9NVL1 165 aa12.55□□□□□ -0.4
CLN6-215ENST00000636674 B4GALT1P15291 398 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 ZNF92Q03936 586 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 PLCXD3Q63HM9 321 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 OR14L1PQ8NHC6 308 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 JSRP1Q96MG2 331 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 ALKBH3Q96Q83 286 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 LYRM2Q9NU23 88 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 FBXO7Q9Y3I1 522 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 G3V3Y1 287 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 RPL36A-HNRNPH2H7BZ11 118 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 MMP9P14780 707 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 NKX2-1P43699 371 aaPredicted RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 BRICD5Q6PL45 260 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 AAED1Q7RTV5 226 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 AGBL5Q8NDL9 886 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 ADGRG7Q96K78 797 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 SGCZQ96LD1 299 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
CLN6-215ENST00000636674 TCFL5Q9UL49 500 aa12.54□□□□□ -0.4
CLN6-215ENST00000636674 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 LAMTOR5O43504 91 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 ATP6V0CP27449 155 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 GNRHRP30968 328 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 NHLH1Q02575 133 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 NRN1LQ496H8 165 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
CLN6-215ENST00000636674 MEX3BQ6ZN04 569 aaKnown RBP12.53□□□□□ -0.4
CLN6-215ENST00000636674 OR2Y1Q8NGV0 311 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 NANPQ8TBE9 248 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 KIAA1456Q9P272 454 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 PI4KAP42356 2102 aa12.53□□□□□ -0.4
CLN6-215ENST00000636674 hCG_1809904A0A1W2PP81 198 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 A0A1W2PR64 198 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 A0A1W2PRV1 198 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 ZNF732B4DXR9 585 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 C9J4A7 227 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 MMP7P09237 267 aaPredicted RBP12.52□□□□□ -0.4
CLN6-215ENST00000636674 GLI4P10075 376 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 EDN3P14138 238 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 CXCL12P48061 93 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 PRSS12P56730 875 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 CARD18P57730 90 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 BAXQ07812 192 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 TGIF1Q15583 401 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 CALHM1Q8IU99 346 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 ZNF611Q8N823 705 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.4
CLN6-215ENST00000636674 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 NAPSAO96009 420 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 OR8U8P0C7N1 319 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 DAOP14920 347 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 PLA2G5P39877 138 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 CLDN15P56746 228 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.41
CLN6-215ENST00000636674 FOXO1Q12778 655 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 CEACAM16Q2WEN9 425 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 COLCA1Q6ZS62 124 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 TBC1D26Q86UD7 250 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
CLN6-215ENST00000636674 SAXO1Q8IYX7 474 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms