RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 MMP24Q9Y5R2 645 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 GVINP1Q7Z2Y8 2422 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 PPYP01298 95 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 NQO2P16083 231 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 GNRHRP30968 328 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 STARD6P59095 220 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 Q0VFX4 171 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 RDH5Q92781 318 aa12.11□□□□□ -0.47
CACNA1A-228ENST00000636610 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 LOC102725191A0A1B0GVB3 256 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 FAM157AC9JC47 383 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 ADAM20O43506 726 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 NGFP01138 241 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 ACAA1P09110 424 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 FOLR3P41439 243 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 MEOX2P50222 304 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 RAC3P60763 192 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 GNMTQ14749 295 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 OR2G3Q8NGZ4 309 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 SPSB1Q96BD6 273 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 LUZP4Q9P127 313 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 FAM166BA8MTA8 275 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 RAB5BP61020 215 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 EIF2S3LQ2VIR3 472 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 LGI3Q8N145 548 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 GAPTQ8N292 157 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 EXTL1Q92935 676 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 TCEAL3Q969E4 200 aa12.1□□□□□ -0.47
CACNA1A-228ENST00000636610 C3orf85A0A1B0GTC6 90 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 APOC1P02654 83 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 SPATA46Q5T0L3 261 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 TBC1D26Q86UD7 250 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 GGNQ86UU5 652 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 KCNJ16Q9NPI9 418 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 DCHS1Q96JQ0 3298 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 PDCD6O75340 191 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 DANCRP0C864 163 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 MLF1P58340 268 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 HIST2H3AQ71DI3 136 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 OR2Y1Q8NGV0 311 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 CNOT1A5YKK6 2376 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-228ENST00000636610 A0A087WZY1 265 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF716A6NP11 495 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 PTAFRP25105 342 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 B3GALT5-AS1P59052 145 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 ARL6IP1Q15041 203 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 NCMAPQ5T1S8 102 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF565Q8N9K5 539 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 OR5C1Q8NGR4 320 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 TMEM171Q8WVE6 324 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 SYT3Q9BQG1 590 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 GPR35Q9HC97 309 aa12.08□□□□□ -0.47
CACNA1A-228ENST00000636610 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF503-AS2A6NEH8 195 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 TERTO14746 1132 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 MPPED1O15442 326 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 GPR137BO60478 399 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 LILRA1O75019 489 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 EXT1Q16394 746 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 PRRG4Q9BZD6 226 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 PLA2G3Q9NZ20 509 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 STARD10Q9Y365 291 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF724A8MTY0 619 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 RRP8O43159 456 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 SYNGR1O43759 233 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 GAPDHP04406 335 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ZNF16P17020 682 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 FUT3P21217 361 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ATP6V0CP27449 155 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 P2RY1P47900 373 aa12.08□□□□□ -0.48
CACNA1A-228ENST00000636610 ARF1P84077 181 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms