RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 WDR13Q9H1Z4 485 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 PIGMQ9H3S5 423 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF286AQ9HBT8 521 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 Q9N2K0 584 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 TMEM100Q9NV29 134 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 NECAP2Q9NVZ3 263 aa10.62□□□□□ -0.71
CACNA1A-219ENST00000635917 TRBV6-6A0A0A6YYG2 114 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 CDIPTO14735 213 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF250P15622 560 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 BMP5P22003 454 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 CD34P28906 385 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ECI1P42126 302 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ARPC4P59998 168 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 IKZF1Q13422 519 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF146Q15072 292 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 OR8G1Q15617 311 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 LPCAT3Q6P1A2 487 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF880Q6PDB4 577 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SLC22A25Q6T423 547 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 Q8IYB0 196 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 USB1Q9BQ65 265 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 POLDIP2Q9Y2S7 368 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ROS1P08922 2347 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 A0A0B4J2A0 478 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SFT2D2O95562 160 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 FABP6P51161 128 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF83P51522 516 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 GAPTQ8N292 157 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 PHB2Q99623 299 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 SHPKQ9UHJ6 478 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 FZR1Q9UM11 496 aa10.61□□□□□ -0.71
CACNA1A-219ENST00000635917 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 HMSDA8MTL9 139 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 ZNF205O95201 554 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 F12P00748 615 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 GLRXP35754 106 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 HERPUD1Q15011 391 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 LIN54Q6MZP7 749 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 POC1AQ8NBT0 407 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 MRPL30Q8TCC3 161 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 DMRTA2Q96SC8 542 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 SMG1Q96Q15 3661 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 KALRNO60229 2985 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 ARID1AO14497 2285 aa10.6□□□□□ -0.71
CACNA1A-219ENST00000635917 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 EEF1E1-BLOC1S5C9J1V9 151 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 MCRIP1C9JLW8 97 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 M0R1B8 84 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 DLL1O00548 723 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 CXCL2P19875 107 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 VAMP1P23763 118 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 IGSF11Q5DX21 431 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 SHEQ5VZ18 495 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 LRP11Q86VZ4 500 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 DPCDQ9BVM2 203 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 CXXC4Q9H2H0 198 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 MSL2Q9HCI7 577 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 ELOVL5Q9NYP7 299 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 TREM2Q9NZC2 230 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
CACNA1A-219ENST00000635917 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 SLC33A1O00400 549 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 CCSO14618 274 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 CRYAAP02489 173 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 GRPP07492 148 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 GCH1P30793 250 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 UCP3P55916 312 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 RGS7BPQ6MZT1 257 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 C11orf88Q6PI97 169 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 WDR82Q6UXN9 313 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 ZNF826PQ6ZT77 177 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 SPERTQ8NA61 448 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 RDH5Q92781 318 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 RIMS4Q9H426 269 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 DSCAMO60469 2012 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 IGHV3-64DA0A0J9YX35 117 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 HSPB6O14558 160 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 HS3ST1O14792 307 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 MPC2O95563 127 aa10.58□□□□□ -0.72
CACNA1A-219ENST00000635917 OR2H2O95918 312 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms