RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 BHLHE23Q8NDY6 225 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 C19orf18Q8NEA5 215 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM83FQ8NEG4 500 aaPredicted RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 ATP6V1C2Q8NEY4 427 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2M7Q8NG81 312 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR1L6Q8NGR2 347 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR9A2Q8NGT5 310 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2A1Q8NGT9 310 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR13G1Q8NGZ3 307 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5B3Q8NH48 314 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR51Q1Q8NH59 317 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR4S2Q8NH73 311 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 CLHC1Q8NHS4 586 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 FNDC9Q8TBE3 224 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM57AQ8TBR7 257 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF502Q8TBZ5 544 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC7A13Q8TCU3 470 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 CD200R1Q8TD46 325 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 ABHD3Q8WU67 409 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 C1orf54Q8WWF1 131 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 DEDD2Q8WXF8 326 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 RGP1Q92546 391 aaPredicted RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 EMG1Q92979 244 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM54Q969K7 222 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 NT5C3BQ969T7 300 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 ISG20Q96AZ6 181 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 CREB3L1Q96BA8 519 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 PPWD1Q96BP3 646 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 IMP4Q96G21 291 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 NAP1L5Q96NT1 182 aaPredicted RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 PRAP1Q96NZ9 151 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SERPINB12Q96P63 405 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5B12Q96R08 314 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR4K3Q96R72 315 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 TIMM17AQ99595 171 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 DOK1Q99704 481 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SH3GL3Q99963 347 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SULT4A1Q9BR01 284 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 UTP23Q9BRU9 249 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OSBPL11Q9BXB4 747 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 C1QTNF6Q9BXI9 259 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 GON7Q9BXV9 100 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 UGT2B28Q9BY64 529 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SHCBP1LQ9BZQ2 653 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 BPESC1Q9GZL8 116 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 OR8D2Q9GZM6 311 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 DRC3Q9H069 523 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 METTL17Q9H7H0 456 aaPredicted RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 PLEKHF2Q9H8W4 249 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 GORASP2Q9H8Y8 452 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 C12orf10Q9HB07 376 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 PROK2Q9HC23 129 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 MRPS30Q9NP92 439 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 FBXO8Q9NRD0 319 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 PRTFDC1Q9NRG1 225 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 AGPAT4Q9NRZ5 378 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 RMND1Q9NWS8 449 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 MYEF2Q9P2K5 600 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC7A8Q9UHI5 535 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 RWDD2AQ9UIY3 292 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 DKKL1Q9UK85 242 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 IKZF2Q9UKS7 526 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 HPCAL4Q9UM19 191 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 TMED5Q9Y3A6 229 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 FIS1Q9Y3D6 152 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 GOLT1BQ9Y3E0 138 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 NPTNQ9Y639 398 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 RFNGQ9Y644 331 aa0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 BZW2Q9Y6E2 419 aaKnown RBP0.61□□□□□ -2.31
SMARCB1-209ENST00000635578 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 RYR1P21817 5038 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 MEGF8Q7Z7M0 2845 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 IGLV1-50A0A075B6I6 118 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 IGLV3-12A0A075B6K2 115 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 UQCRHLA0A096LP55 91 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 TRGV5A0A0B4J1U4 118 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF816-ZNF321PA0A0X1KG74 233 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1B0GUH1 482 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1B0GVX0 72 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1B0GW55 424 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1W2PRD5 423 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1W2PRF3 423 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A1W2PRM7 423 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 GOLGA6L4A6NEF3 574 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 SIGLEC16A6NMB1 481 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 SNTNA6NMZ2 147 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF726A6NNF4 738 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF850A8MQ14 1090 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF705GA8MUZ8 300 aaPredicted RBP0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 SUPT3HB4E1H0 165 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 E5RI56 91 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 RPL36A-HNRNPH2H7BZ11 118 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 M0R1B8 84 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 PLPP1O14494 284 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 UBFD1O14562 309 aaKnown RBP0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 AIM2O14862 343 aa0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 LSM1O15116 133 aaKnown RBP0.6□□□□□ -2.31
SMARCB1-209ENST00000635578 ANGPT2O15123 496 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms