RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
LINC00339-207ENST00000634712 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
LINC00339-207ENST00000634712 ING3Q9NXR8 418 aa12.81□□□□□ -0.36
LINC00339-207ENST00000634712 ZNRD1Q9P1U0 126 aa12.81□□□□□ -0.36
LINC00339-207ENST00000634712 TRGV10A0A0A0MS01 117 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 GPX5O75715 221 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 CDRT1O95170 752 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 IGFBP3P17936 291 aaPredicted RBP12.8□□□□□ -0.36
LINC00339-207ENST00000634712 DLX6P56179 175 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 AESQ08117 197 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 SPHARQ15513 63 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 MED22Q15528 200 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 Q6P435 159 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 GDPGP1Q6ZNW5 385 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 CCDC90BQ9GZT6 254 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
LINC00339-207ENST00000634712 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
LINC00339-207ENST00000634712 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
LINC00339-207ENST00000634712 RGS10O43665 173 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
LINC00339-207ENST00000634712 ATP6V1G2O95670 118 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 MAS1P04201 325 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 ARG1P05089 322 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 IGHV1-8P0DP01 117 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 FSTP19883 344 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 OMGP23515 440 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 DYNC1I2Q13409 638 aaKnown RBP12.79□□□□□ -0.36
LINC00339-207ENST00000634712 IL13RA2Q14627 380 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 KRBOX4Q5JUW0 171 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 OSR2Q8N2R0 312 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 MS4A15Q8N5U1 240 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 OR51T1Q8NGJ9 327 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 OR5R1Q8NH85 324 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 NKX3-1Q99801 234 aaPredicted RBP12.79□□□□□ -0.36
LINC00339-207ENST00000634712 GAL3ST2Q9H3Q3 398 aa12.79□□□□□ -0.36
LINC00339-207ENST00000634712 TRAV8-7A0A075B6U6 113 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 HSPB6O14558 160 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 GPR137BO60478 399 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 CSN2P05814 226 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 SERPINA2P20848 420 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 GLIPR1P48060 266 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
LINC00339-207ENST00000634712 SLC35A2P78381 396 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 DOC2BQ14184 412 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 GPR176Q14439 515 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-207ENST00000634712 PAN3Q58A45 887 aaKnown RBP12.78□□□□□ -0.36
LINC00339-207ENST00000634712 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 TAF15Q92804 592 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00339-207ENST00000634712 DERL3Q96Q80 235 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 OR5M11Q96RB7 305 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 SSX3Q99909 188 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 BARHL1Q9BZE3 327 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 ST3GAL6Q9Y274 331 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
LINC00339-207ENST00000634712 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 POM121CA8CG34 1229 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 CLPXO76031 633 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 VHLP40337 213 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 RAG2P55895 527 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 ACSM3Q53FZ2 586 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 OR52W1Q6IF63 320 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 TCF23Q7RTU1 214 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 CDH26Q8IXH8 852 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 Q8NFD4 153 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 SGCDQ92629 289 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 CORO2AQ92828 525 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 UFD1Q92890 307 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 TMED9Q9BVK6 235 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 DUSP21Q9H596 190 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 TCF7L1Q9HCS4 588 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 TAS2R3Q9NYW6 316 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 C1RLQ9NZP8 487 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 RAB26Q9ULW5 256 aa12.77□□□□□ -0.37
LINC00339-207ENST00000634712 MRPS28Q9Y2Q9 187 aaKnown RBP12.77□□□□□ -0.37
LINC00339-207ENST00000634712 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 ODAMA1E959 279 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 MEGF11A6BM72 1044 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 H3BUX3 64 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-207ENST00000634712 HSMCR30P0CW71 290 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 GTF2F2P13984 249 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 MDKP21741 143 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-207ENST00000634712 GPR50Q13585 617 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 TAF9Q16594 264 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 LRRC75BQ2VPJ9 315 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 DHRS7BQ6IAN0 325 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms