RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 OR5L1Q8NGL2 311 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 HAVCR2Q8TDQ0 301 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ING5Q8WYH8 240 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 TCEAL3Q969E4 200 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 PRAP1Q96NZ9 151 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ALS2CR12Q96Q35 445 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 PKMYT1Q99640 499 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ZNF649Q9BS31 505 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 SHANK2-AS3Q9BTD1 123 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 SFXN3Q9BWM7 321 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 BCL2L14Q9BZR8 327 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 NXF2Q9GZY0 626 aaKnown RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 COA1Q9GZY4 146 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 RHOFQ9HBH0 211 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 HRASLSQ9HDD0 168 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 IFT46Q9NQC8 304 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 RGS18Q9NS28 235 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 TRMT112Q9UI30 125 aaKnown RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ANXA10Q9UJ72 324 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ZNF337Q9Y3M9 751 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 CHD5Q8TDI0 1954 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 COL5A3P25940 1745 aaPredicted RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 DICER1Q9UPY3 1922 aaKnown RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 NCOA1Q15788 1441 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 C9orf84Q5VXU9 1444 aa0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 ZCCHC11Q5TAX3 1644 aaKnown RBP0.97□□□□□ -2.25
NPHP3-ACAD11-202ENST00000632629 A0A1W2PP64 1363 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 EIF3AQ14152 1382 aaKnown RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ABCC11Q96J66 1382 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ELP1O95163 1332 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 A0A0A6YYH2 397 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 IGHV6-1A0A0B4J1U7 121 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MYBPHLA2RUH7 354 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 A6NJ64 397 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TMEM210A6NLX4 147 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR2AT4A6NND4 320 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 C21orf140B9A014 251 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 KRBOX1C9JBD0 128 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 GOLGA8KD6RF30 607 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 GPR171O14626 319 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TRAPPC3O43617 180 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MPZL2O60487 215 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 EIF1BO60739 113 aaKnown RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CCDC22O60826 627 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 PSIP1O75475 530 aaKnown RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TNFAIP8O95379 198 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 EPPINO95925 133 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CA2P00918 260 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 PTHP01270 115 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MMP7P09237 267 aaPredicted RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 GIMD1P0DJR0 217 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 SLC2A1P11166 492 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MYL9P24844 172 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 IL3RAP26951 378 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 FUSP35637 526 aaKnown RBP eCLIP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ARR3P36575 388 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 EIF1P41567 113 aaKnown RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 RBM34P42696 430 aaKnown RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MAGEA2P43356 314 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 GCLMP48507 274 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CDC34P49427 236 aaPredicted RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 NKX2-5P52952 324 aaPredicted RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CLDN12P56749 244 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 DSTNP60981 165 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 FAM3AP98173 230 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 MLLT11Q13015 90 aaPredicted RBP0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 PNOCQ13519 176 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 RAB31Q13636 194 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ZSCAN26Q16670 478 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 C4orf26Q17RF5 130 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 Q499Y3 187 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CDNFQ49AH0 187 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 YIF1BQ5BJH7 314 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TTC32Q5I0X7 151 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TEX30Q5JUR7 227 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 HHATQ5VTY9 493 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR2T5Q6IEZ7 315 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 FAM173BQ6P4H8 233 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 GUSBP11Q6P575 273 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 PLET1Q6UQ28 207 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 TMEM136Q6ZRR5 245 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 SSX6Q7RTT6 188 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 LRRC34Q8IZ02 419 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ATPAF2Q8N5M1 289 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 ZIC4Q8N9L1 334 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 C19orf18Q8NEA5 215 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 LFNGQ8NES3 379 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR1M1Q8NGA1 313 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR4K17Q8NGC6 315 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR11H7Q8NGC8 314 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR2T29Q8NH02 315 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR51Q1Q8NH59 317 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR10G6Q8NH81 332 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 FAM45AQ8TCE6 357 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 CCL17Q92583 94 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 SMIM19Q96E16 107 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 KCNS1Q96KK3 526 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 OR4K3Q96R72 315 aa0.96□□□□□ -2.26
NPHP3-ACAD11-202ENST00000632629 VAT1Q99536 393 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms