RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TMEM241Q24JQ0 296 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 TMEM171Q8WVE6 324 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 MMP26Q9NRE1 261 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 OR2T8A6NH00 312 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 PTBP3O95758 552 aaKnown RBP10.38□□□□□ -0.75
SHPRH-211ENST00000629427 SLC35E4Q6ICL7 350 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 Q6ZNX1 250 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 MPC1Q9Y5U8 109 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 A0A1B0GTQ1 180 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 CTAG2O75638 210 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 MGPP08493 103 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 PSMB2P49721 201 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 SIGLEC14Q08ET2 396 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 NTMQ9P121 344 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 GLI3P10071 1580 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 SPNP16150 400 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 RPS4Y1P22090 263 aaKnown RBP10.38□□□□□ -0.75
SHPRH-211ENST00000629427 RANP62826 216 aaKnown RBP10.38□□□□□ -0.75
SHPRH-211ENST00000629427 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 OR10G4Q8NGN3 311 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 OR10G9Q8NGN4 311 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 OR10G7Q8NGN6 311 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 NTNG2Q96CW9 530 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 TRBV23-1A0A0A0MS06 115 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 CTGFP29279 349 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 PPP1R1AQ13522 171 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 HLXQ14774 488 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-211ENST00000629427 CLEC9AQ6UXN8 241 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 VSTM2AQ8TAG5 236 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 MS4A7Q9GZW8 240 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-211ENST00000629427 SELENOPP49908 381 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 HIKESHIQ53FT3 197 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 NUBPLQ8TB37 319 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 SFT2D2O95562 160 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 NQO2P16083 231 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 ZBTB37Q5TC79 503 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 DEGS2Q6QHC5 323 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 R3HDM4Q96D70 268 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 COX14Q96I36 57 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
SHPRH-211ENST00000629427 PATE3B3GLJ2 98 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 CDIPTO14735 213 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 GPR27Q9NS67 375 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 CHD5Q8TDI0 1954 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 CBY3A6NI87 242 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 FCN1O00602 326 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 ALX3O95076 343 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 PEX11BO96011 259 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 DHRS11Q6UWP2 260 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 ZBTB44Q8NCP5 570 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 PIK3IP1Q96FE7 263 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 EXOGQ9Y2C4 368 aaKnown RBP10.37□□□□□ -0.75
SHPRH-211ENST00000629427 DHRS2Q13268 280 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF547Q8IVP9 402 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 RGPD3A6NKT7 1758 aaPredicted RBP10.37□□□□□ -0.75
SHPRH-211ENST00000629427 COX6B1P14854 86 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 DOLPP1Q86YN1 238 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 Q8WTZ3 238 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
SHPRH-211ENST00000629427 FAM24AA6NFZ4 105 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 U3KQ87 197 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 C16orf97H3BN30 126 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 CST4P01036 141 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 GGNBP1Q5YKI7 109 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 EIF4E3Q8N5X7 224 aaKnown RBP10.37□□□□□ -0.75
SHPRH-211ENST00000629427 HEATR1Q9H583 2144 aaKnown RBP10.37□□□□□ -0.75
SHPRH-211ENST00000629427 VSIG4Q9Y279 399 aa10.37□□□□□ -0.75
SHPRH-211ENST00000629427 MAP1LC3B2A6NCE7 125 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 FAM87AP0C7U9 286 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 CD82P27701 267 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 CLEC2AQ6UVW9 174 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 MRPL37Q9BZE1 423 aaKnown RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 MAP1LC3BQ9GZQ8 125 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 HEXA-AS1Q9H8Q6 139 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 RNF7Q9UBF6 113 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 LIPGQ9Y5X9 500 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 GSTZ1O43708 216 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 PRF1P14222 555 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 GEMIN2O14893 280 aaKnown RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 TO15178 435 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 ADAM11O75078 769 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 NDUFB6O95139 128 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 WNT3P56703 355 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 RAB32Q13637 225 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 AANATQ16613 207 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 KCNK15Q9H427 330 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 TINAGQ9UJW2 476 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 CES1P1Q9UKY3 287 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 PHOX2AO14813 284 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 PRSS1P07477 247 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 CCL3P10147 92 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms