RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 IL5P05113 134 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 UBBP0CG47 229 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 LINC00205P59089 165 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RPUSD3Q6P087 351 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 CMTM1Q8IZ96 169 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 GAPTQ8N292 157 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 MUCL1Q96DR8 90 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 SDSLQ96GA7 329 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DDA1Q9BW61 102 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 B3GNT2Q9NY97 397 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 TRAV17A0A0B4J275 112 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 FAM24AA6NFZ4 105 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 SRSF10O75494 262 aaKnown RBP6.46□□□□□ -1.37
PKP4-217ENST00000628904 CD1AP06126 327 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 TDGF1P13385 188 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 OR8B8Q15620 311 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 SLC25A53Q5H9E4 307 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 KCNRGQ8N5I3 272 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 OR10J5Q8NHC4 309 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 FAM213BQ8TBF2 198 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 RPS4Y2Q8TD47 263 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 GLYATL2Q8WU03 294 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 SPSB1Q96BD6 273 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 OCSTAMPQ9BR26 566 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 NPDC1Q9NQX5 325 aaPredicted RBP6.46□□□□□ -1.37
PKP4-217ENST00000628904 SLC17A5Q9NRA2 495 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 ZNF391Q9UJN7 358 aa6.46□□□□□ -1.37
PKP4-217ENST00000628904 FOXD3Q9UJU5 478 aaPredicted RBP6.46□□□□□ -1.37
PKP4-217ENST00000628904 MED12LQ86YW9 2145 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 TRGV8A0A0C4DH27 118 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 RFPL4AA6NLU0 287 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 SERPINE3A8MV23 424 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 RFPL4AL1F8VTS6 287 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 TOR1AO14656 332 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 PDCD6O75340 191 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FCGR3AP08637 254 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 CAMLGP49069 296 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FHITP49789 147 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 TNFSF10P50591 281 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 GFRA1P56159 465 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 P2RX3P56373 397 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 CSRP2Q16527 193 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 TFAP2EQ6VUC0 442 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 SLC51BQ86UW2 128 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FAM58AQ8N1B3 248 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 OR1S2Q8NGQ3 325 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 IER2Q9BTL4 223 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 SLC2A9Q9NRM0 540 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.38
PKP4-217ENST00000628904 POLQO75417 2590 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 SULT1C2O00338 296 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FAM87AP0C7U9 286 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 CBR1P16152 277 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 CD80P33681 288 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 OR3A1P47881 315 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 TAS2R31P59538 309 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 NHLH2Q02577 135 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FAM27E3Q08E93 113 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 AANATQ16613 207 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 GPR157Q5UAW9 335 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 FIP1L1Q6UN15 594 aaKnown RBP6.46□□□□□ -1.38
PKP4-217ENST00000628904 SLC25A42Q86VD7 318 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 PXT1Q8NFP0 134 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 OIT3Q8WWZ8 545 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 SARAFQ96BY9 339 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 CMTM3Q96MX0 182 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 PCDHB16Q9NRJ7 776 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 MTCH1Q9NZJ7 389 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 PROCRQ9UNN8 238 aa6.46□□□□□ -1.38
PKP4-217ENST00000628904 C10orf142B7Z368 130 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 MFNGO00587 321 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 TERTO14746 1132 aaKnown RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 DUS4LO95620 317 aaKnown RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 ZNF735P0CB33 412 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 ZBTB25P24278 435 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 RPL12P30050 165 aaKnown RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 ARR3P36575 388 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 ZNF133P52736 654 aaPredicted RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 CCL8P80075 99 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 ZNF169Q14929 603 aaPredicted RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 FAM76BQ5HYJ3 339 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 LY6G6FQ5SQ64 297 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 C10orf128Q5T292 105 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 ACOT7LQ6ZUV0 252 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 OR2W3Q7Z3T1 314 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 C9orf106Q8NAJ2 232 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 FN3KRPQ9HA64 309 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 OR1A1Q9P1Q5 309 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 PCDHB10Q9UN67 800 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 FBXO7Q9Y3I1 522 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 A0A0U1RQV5 110 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 ADAM20O43506 726 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 TPT1P13693 172 aaKnown RBP6.45□□□□□ -1.38
PKP4-217ENST00000628904 ZNF708P17019 499 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 CEACAM6P40199 344 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 GNG3P63215 75 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 TUSC1Q2TAM9 212 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 SPANXN5Q5MJ07 72 aa6.45□□□□□ -1.38
PKP4-217ENST00000628904 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms