RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 RPL31P62899 125 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 MXD1Q05195 221 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 TAF9Q16594 264 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 OR2W3Q7Z3T1 314 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM185AQ8N0U4 392 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 TEX29Q8N6K0 151 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 OR4S1Q8NGB4 309 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 C8orf46Q8TAG6 207 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 DACT3Q96B18 629 aaPredicted RBP15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM3DQ96BQ1 224 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 DMRTB1Q96MA1 342 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 CHST6Q9GZX3 395 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 SHARPINQ9H0F6 387 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 PPA2Q9H2U2 334 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 SPACA1Q9HBV2 294 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 AUP1Q9Y679 476 aa15.8■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A10PA6NDY2 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A18PA6NE21 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A16PA6NEW6 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A20PA6NIJ5 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A8PA6NJQ4 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A7PA6NKC0 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A22PA8MWA6 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A12PA8MX19 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A5PA8MXJ8 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A23PA8MXZ1 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 INAFM1C9JVW0 142 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A15PP0C7V4 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A13PP0C7W8 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A14PP0C7W9 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM90A24PP0C7X0 464 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 CFPP27918 469 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 OR3A1P47881 315 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 PAX8Q06710 450 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 EDDM3AQ14507 147 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 FAM120AOSQ5T036 256 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 ATAD3CQ5T2N8 411 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 GPR107Q5VW38 600 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 OR10K2Q6IF99 312 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 ANKRD13BQ86YJ7 626 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 CMTM4Q8IZR5 234 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 LY6G5BQ8NDX9 201 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 OR51D1Q8NGF3 324 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 Q96M66 194 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 TMPRSS13Q9BYE2 586 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 IFT22Q9H7X7 185 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 ONECUT1Q9UBC0 465 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 LPAR3Q9UBY5 353 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 DSCAML1Q8TD84 2053 aa15.79■□□□□ 0.12
SQSTM1-216ENST00000626660 NAV3Q8IVL0 2385 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 A0A1W2PPH5 198 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 TMEM14DPA8MWL7 114 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 CLEC2LP0C7M8 214 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 RPS27AP62979 156 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 METTL11BQ5VVY1 283 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 NR2C2APQ86WQ0 139 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 OR4M1Q8NGD0 313 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 URM1Q9BTM9 101 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 KCNK15Q9H427 330 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 C19orf12Q9NSK7 152 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 CDC42EP3Q9UKI2 254 aa15.78■□□□□ 0.12
SQSTM1-216ENST00000626660 FN1P02751 2386 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 TRAV24A0A0B4J272 114 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 HSPB6O14558 160 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 CSN2P05814 226 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 ERP29P30040 261 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 KCNJ3P48549 501 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 P2RX3P56373 397 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 QRFPP83859 136 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 UNC119Q13432 240 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 C2orf76Q3KRA6 126 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 SFXN4Q6P4A7 337 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 KIR3DL3Q8N743 410 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 SUMF2Q8NBJ7 301 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 NEK7Q8TDX7 302 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 DPCDQ9BVM2 203 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 BEX2Q9BXY8 128 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 LIN7BQ9HAP6 207 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 FBLN5Q9UBX5 448 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 DAPK2Q9UIK4 370 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 KPTNQ9Y664 436 aa15.77■□□□□ 0.12
SQSTM1-216ENST00000626660 KIAA2026Q5HYC2 2103 aa15.77■□□□□ 0.11
SQSTM1-216ENST00000626660 hADV38S2A0JD32 116 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 GABARAPO95166 117 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 SLC2A2P11168 524 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 SRP14P37108 136 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 ARF6P62330 175 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 BLMHQ13867 455 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 RBM39Q14498 530 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 ATXN7L3Q14CW9 347 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 CROCCP3Q8IVE0 287 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 TM2D1Q9BX74 207 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 BARHL1Q9BZE3 327 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 RAB22AQ9UL26 194 aa15.76■□□□□ 0.11
SQSTM1-216ENST00000626660 MCRIP1C9JLW8 97 aa15.75■□□□□ 0.11
SQSTM1-216ENST00000626660 IL1AP01583 271 aa15.75■□□□□ 0.11
SQSTM1-216ENST00000626660 FUT3P21217 361 aa15.75■□□□□ 0.11
SQSTM1-216ENST00000626660 TGFBR1P36897 503 aa15.75■□□□□ 0.11
SQSTM1-216ENST00000626660 SERPINB10P48595 397 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms