RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 CARD18P57730 90 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 EWSR1Q01844 656 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00552-201ENST00000625151 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF100Q8IYN0 542 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 NKX2-6A6NCS4 301 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 CXCL13O43927 109 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 OR7C1O76099 320 aaPredicted RBP13.12□□□□□ -0.31
LINC00552-201ENST00000625151 CFIP05156 583 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 EDN3P14138 238 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
LINC00552-201ENST00000625151 RNF212Q495C1 297 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 CCDC71LQ8N9Z2 235 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 OR14L1PQ8NHC6 308 aa13.12□□□□□ -0.31
LINC00552-201ENST00000625151 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
LINC00552-201ENST00000625151 TRAV20A0A0B4J274 112 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 C3orf85A0A1B0GTC6 90 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 DNPH1O43598 174 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 AGAP20933 346 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 RAB5CP51148 216 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 OR8B8Q15620 311 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 KDF1Q8NAX2 398 aaPredicted RBP13.11□□□□□ -0.31
LINC00552-201ENST00000625151 SUMF1Q8NBK3 374 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 NAT6Q93015 286 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 hCG_1809904A0A1W2PP81 198 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 A0A1W2PR64 198 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 A0A1W2PRV1 198 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 K7N7A8 449 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 MPPED1O15442 326 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 ARG1P05089 322 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 GNMTQ14749 295 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 TMEM211Q6ICI0 200 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 TUBA4BQ9H853 241 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
LINC00552-201ENST00000625151 C9J4A7 227 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 UBE2CO00762 179 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 OR13C7P0DN81 318 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 FUT3P21217 361 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 GNRHRP30968 328 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 SRD5A2P31213 254 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 CLINT1Q14677 625 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 SLC25A26Q70HW3 274 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 OR2Y1Q8NGV0 311 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 CD300LFQ8TDQ1 290 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF816-ZNF321PA0A0X1KG74 233 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 IGSF23A1L1A6 192 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 SULT1A1P50225 295 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 OR2C3Q8N628 320 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 OR10D3Q8NH80 312 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 GPHA2Q96T91 129 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 RARRES2Q99969 163 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 TMEM222Q9H0R3 208 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
LINC00552-201ENST00000625151 A0A1W2PPE2 198 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 GPR37O15354 613 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 SP9P0CG40 484 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 CLDN15P56746 228 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 SLC16A13Q7RTY0 426 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 NANPQ8TBE9 248 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 GPR35Q9HC97 309 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 KCNJ16Q9NPI9 418 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 RAB5AP20339 215 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 OMGP23515 440 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 ZNF124Q15973 351 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 KCNE4Q8WWG9 221 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 ADGRG7Q96K78 797 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 PBDC1Q9BVG4 233 aa13.09□□□□□ -0.31
LINC00552-201ENST00000625151 CDS2O95674 445 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 IGHV3-9P01782 118 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 CCL20P78556 96 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
LINC00552-201ENST00000625151 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 SLC23A3Q6PIS1 610 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 CPEB3Q8NE35 698 aaKnown RBP13.08□□□□□ -0.32
LINC00552-201ENST00000625151 ABHD3Q8WU67 409 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 EXTL1Q92935 676 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
LINC00552-201ENST00000625151 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms