RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KCNK7Q9Y2U2 307 aa14.93□□□□□ -0.02
PTCHD3-202ENST00000622555 PPIAL4AQ9Y536 164 aa14.93□□□□□ -0.02
PTCHD3-202ENST00000622555 CENPEQ02224 2701 aa14.93□□□□□ -0.02
PTCHD3-202ENST00000622555 IGKV1D-17A0A075B6S4 117 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 TRAV38-1A0A0B4J264 116 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 TRAV24A0A0B4J272 114 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 LINC00854A0A1B0GVQ3 168 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 CTDSPLO15194 276 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 PRDX2P32119 198 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 PRSS3P35030 304 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 GABRA2P47869 451 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 ARL6IP1Q15041 203 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 SUMF2Q8NBJ7 301 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 SULT4A1Q9BR01 284 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 THAP7Q9BT49 309 aaPredicted RBP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 RCC2Q9P258 522 aaKnown RBP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 PLEKHA6Q9Y2H5 1048 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 UBE2QL1A1L167 161 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 MEIOCA2RUB1 952 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 SERPINE3A8MV23 424 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 SLC33A1O00400 549 aaPredicted RBP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 GNG2P59768 71 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 KRTAP10-9P60411 292 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 DGCR2P98153 550 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 GUCA2AQ02747 115 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 CARTPTQ16568 116 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 PAN3Q58A45 887 aaKnown RBP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 MZT2BQ6NZ67 158 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 CD177Q8N6Q3 437 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 NEK7Q8TDX7 302 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 ST8SIA4Q92187 359 aa14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 DPCDQ9BVM2 203 aaPredicted RBP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTCHD3-202ENST00000622555 ARID1AO14497 2285 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 MCRIP1C9JLW8 97 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 LYRM1O43325 122 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 GSTZ1O43708 216 aaPredicted RBP14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 LANCL1O43813 399 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 GYPAP02724 150 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 BTG1P62324 171 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 MRPS10P82664 201 aaKnown RBP14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 COL10A1Q03692 680 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 ARFRP1Q13795 201 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 PNLIPRP3Q17RR3 467 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 STUMQ69YW2 141 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 BPIFB2Q8N4F0 458 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 ANGPTL6Q8NI99 470 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 SMIM4Q8WVI0 70 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 NUDCD2Q8WVJ2 157 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 FCAMRQ8WWV6 532 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 METRNQ9UJH8 293 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 ZNF222Q9UK12 451 aa14.91□□□□□ -0.02
PTCHD3-202ENST00000622555 IGHV4-39P01824 125 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 MELTFP08582 738 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 ZMYND11Q15326 602 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 ASCC1Q8N9N2 400 aaKnown RBP14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 OR52I2Q8NH67 350 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 DYRK2Q92630 601 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 MMP28Q9H239 520 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 CHODLQ9H9P2 273 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 SEBOXQ9HB31 216 aaPredicted RBP14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 AK3Q9UIJ7 227 aa14.9□□□□□ -0.02
PTCHD3-202ENST00000622555 GABARAPH6UMI1 98 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 CD3GP09693 182 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TRAPPC2P0DI81 140 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TRAPPC2BP0DI82 140 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 LMO1P25800 156 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 RBM39Q14498 530 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 AKAP14Q86UN6 197 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TIMD4Q96H15 378 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 PPA2Q9H2U2 334 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 SCPEP1Q9HB40 452 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 MEIS3P1A6NDR6 274 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 NKX6-3A6NJ46 265 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 PPIHO43447 177 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 PSPNO60542 156 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 GLAP06280 429 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 LPLP06858 475 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 MRPS15P82914 257 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 AVPI1Q5T686 147 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TRAPPC6BQ86SZ2 158 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 ENKURQ8TC29 256 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 GPX8Q8TED1 209 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 CCL13Q99616 98 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 CMSS1Q9BQ75 279 aaKnown RBP14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 CHST6Q9GZX3 395 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TMEM165Q9HC07 324 aa14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 MYOZ1Q9NP98 299 aaPredicted RBP14.89□□□□□ -0.03
PTCHD3-202ENST00000622555 TMEM82A0PJX8 343 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 SULT1C2O00338 296 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 SSX5O60225 188 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 CA11O75493 328 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 AMY2BP19961 511 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 MDH2P40926 338 aaKnown RBP14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 ATP5J2P56134 94 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 KCNJ8Q15842 424 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 RAB1CQ92928 201 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 SDSLQ96GA7 329 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 GAFA1Q96PS6 74 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms