RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ATP6V1FQ16864 119 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 OR4C5Q8NGB2 326 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 OR56B2PQ8NGI1 322 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 IFI44Q8TCB0 444 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
CDH1-214ENST00000621016 ADGRG7Q96K78 797 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 UTP23Q9BRU9 249 aaKnown RBP9.35□□□□□ -0.91
CDH1-214ENST00000621016 OCIAD1Q9NX40 245 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 B3GAT1Q9P2W7 334 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 IL19Q9UHD0 177 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 RARRES3Q9UL19 164 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 SVILO95425 2214 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 ATG2AQ2TAZ0 1938 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 ZBTB25P24278 435 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 MMP16P51512 607 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 FXYD4P59646 89 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 MMDQ15546 238 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 LPAL2Q16609 132 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 SP6Q3SY56 376 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 C6orf201Q7Z4U5 140 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
CDH1-214ENST00000621016 OR5H2Q8NGV7 314 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 M1APQ8TC57 530 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 PLEK2Q9NYT0 353 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 ZNF581Q9P0T4 197 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 SPTBN2O15020 2390 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 CDC14BO60729 498 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TMEM225BP0DP42 221 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 C9orf135Q5VTT2 229 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ZNF573Q86YE8 665 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 AQP3Q92482 292 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 SHANK1Q9Y566 2161 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ZNF407Q9C0G0 2248 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 CCDC163A0A0D9SF12 145 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 SPRY1O43609 319 aaPredicted RBP9.34□□□□□ -0.91
CDH1-214ENST00000621016 LCATP04180 440 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 PSMB6P28072 239 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 DUSP3P51452 185 aaPredicted RBP9.34□□□□□ -0.91
CDH1-214ENST00000621016 TMEM50BP56557 158 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ELOBQ15370 118 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 DNM1P46Q6ZS02 220 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 P4HA3Q7Z4N8 544 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 NKAIN3Q8N8D7 197 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TMEM37Q8WXS4 190 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 LPAR5Q9H1C0 372 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TAF9BQ9HBM6 251 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 SEPSECSQ9HD40 501 aaKnown RBP9.34□□□□□ -0.91
CDH1-214ENST00000621016 OR5AC2Q9NZP5 309 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 B3GALT5Q9Y2C3 310 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 NDUFS8O00217 210 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ZFAND5O76080 213 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 HPRT1P00492 218 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 IGLV3-19P01714 112 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 CCNOP22674 350 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TLE1Q04724 770 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TAF9Q16594 264 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 TMEM156Q8N614 296 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ADPRHL1Q8NDY3 354 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 ST8SIA1Q92185 356 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 SLC17A5Q9NRA2 495 aa9.34□□□□□ -0.91
CDH1-214ENST00000621016 BOD1L1Q8NFC6 3051 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 A0A1B0GTI1 187 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 A0A1W2PQM1 296 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
CDH1-214ENST00000621016 SNAPC5O75971 98 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 MLF1P58340 268 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 ARL6IP1Q15041 203 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 PLPPR5Q32ZL2 321 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 CHRFAM7AQ494W8 412 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 CST9LP1Q5W188 147 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 WDR25Q64LD2 544 aaPredicted RBP9.33□□□□□ -0.92
CDH1-214ENST00000621016 CLEC18BQ6UXF7 455 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 CPEB2Q7Z5Q1 589 aaKnown RBP9.33□□□□□ -0.92
CDH1-214ENST00000621016 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 ZNF441Q8N8Z8 693 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 PNLDC1Q8NA58 520 aaKnown RBP9.33□□□□□ -0.92
CDH1-214ENST00000621016 IL22RA2Q969J5 263 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 MUCL1Q96DR8 90 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 RASL10BQ96S79 203 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 ALKBH4Q9NXW9 302 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 LUZP4Q9P127 313 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 A0A1B0GUS0 222 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 NKX6-3A6NJ46 265 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 PMELP40967 661 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 ASCL1P50553 236 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 KISS1Q15726 138 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 C1orf100Q5SVJ3 147 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 UNQ5815/PRO19632Q6UWF5 114 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 DRAM2Q6UX65 266 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 LHFPL4Q7Z7J7 247 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 RAB39BQ96DA2 213 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
CDH1-214ENST00000621016 ARV1Q9H2C2 271 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms