RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TMEM225BP0DP42 221 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 MRPS10P82664 201 aaKnown RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 SLC22A6Q4U2R8 563 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 RAB12Q6IQ22 244 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 NLRC3Q7RTR2 1065 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 OR5A2Q8NGI9 324 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 SETD6Q8TBK2 473 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 METTL9Q9H1A3 318 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 NOP16Q9Y3C1 178 aaKnown RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 GSTZ1O43708 216 aaPredicted RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 MPIG6BO95866 241 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 IGHV4-38-2P0DP08 117 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 INPP1P49441 399 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 HOXA4Q00056 320 aaPredicted RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 MAB21L1Q13394 359 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 AWAT1Q58HT5 328 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 HACD4Q5VWC8 232 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 LYPD2Q6UXB3 125 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 POC5Q8NA72 575 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 PXT1Q8NFP0 134 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 OR5P3Q8WZ94 311 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 URM1Q9BTM9 101 aaKnown RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 ADAT1Q9BUB4 502 aaKnown RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 ELL3Q9HB65 397 aaPredicted RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 CLN8Q9UBY8 286 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
CD40-207ENST00000620709 IGHV2-70DA0A0C4DH43 119 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 SPRY1O43609 319 aaPredicted RBP13.38□□□□□ -0.27
CD40-207ENST00000620709 ZNF780AO75290 641 aaPredicted RBP13.38□□□□□ -0.27
CD40-207ENST00000620709 GPM6AP51674 278 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 GNG3P63215 75 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 PAX8Q06710 450 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 PDZK1IP1Q13113 114 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 GPR176Q14439 515 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 RSU1Q15404 277 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 MPPED2Q15777 294 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 ZSCAN4Q8NAM6 433 aaPredicted RBP13.38□□□□□ -0.27
CD40-207ENST00000620709 MINDY2Q8NBR6 621 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 TMEM104Q8NE00 496 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 RNF170Q96K19 258 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 NUDT16L1Q9BRJ7 211 aaKnown RBP13.38□□□□□ -0.27
CD40-207ENST00000620709 THAP7Q9BT49 309 aaPredicted RBP13.38□□□□□ -0.27
CD40-207ENST00000620709 FN3KRPQ9HA64 309 aa13.38□□□□□ -0.27
CD40-207ENST00000620709 DOCK11Q5JSL3 2073 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 TRAV18A0A075B6X5 111 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 ZNF732B4DXR9 585 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 GABARAPH6UMI1 98 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 PLATP00750 562 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 CHRM2P08172 466 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 SERPINA2P20848 420 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 PRTN3P24158 256 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 CD200P41217 278 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 DGCR2P98153 550 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 SFRP4Q6FHJ7 346 aaPredicted RBP13.37□□□□□ -0.27
CD40-207ENST00000620709 ASCL4Q6XD76 172 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 OR8S1Q8NH09 359 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 CHPT1Q8WUD6 406 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
CD40-207ENST00000620709 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 RTL8AQ9BWD3 113 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 FGF23Q9GZV9 251 aaPredicted RBP13.37□□□□□ -0.27
CD40-207ENST00000620709 SLC22A4Q9H015 551 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 LPAR5Q9H1C0 372 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 BANF2Q9H503 90 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 PCDHB16Q9NRJ7 776 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 TBC1D24Q9ULP9 559 aa13.37□□□□□ -0.27
CD40-207ENST00000620709 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 ANGPTL7O43827 346 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 PTTG1O95997 202 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 CSTBP04080 98 aaKnown RBP13.36□□□□□ -0.27
CD40-207ENST00000620709 GRPP07492 148 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 MGMTP16455 207 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 RPS27AP62979 156 aaKnown RBP13.36□□□□□ -0.27
CD40-207ENST00000620709 ASAH1Q13510 395 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 ZNF573Q86YE8 665 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 CALHM1Q8IU99 346 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 SAXO1Q8IYX7 474 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 CELF2-AS1Q8N7Q2 184 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 OR10K1Q8NGX5 313 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 ERGIC1Q969X5 290 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 AUNIPQ9H7T9 357 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 RNF7Q9UBF6 113 aa13.36□□□□□ -0.27
CD40-207ENST00000620709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.35□□□□□ -0.27
CD40-207ENST00000620709 A0A1W2PP11 408 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 A6NLC8 198 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 RAB27BO00194 218 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 HTR3BO95264 441 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 CPT2P23786 658 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 GATA4P43694 442 aa13.35□□□□□ -0.27
CD40-207ENST00000620709 HAAOP46952 286 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms