RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 NTSR1P30989 418 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 MGAT2Q10469 447 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 C1orf100Q5SVJ3 147 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 Q6ZWC4 215 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 DPY19L4Q7Z388 723 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 BCL2L2Q92843 193 aaPredicted RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 IL22RA2Q969J5 263 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 OR2A5Q96R48 311 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 NUDT16L1Q9BRJ7 211 aaKnown RBP9.05□□□□□ -0.96
VPS11-207ENST00000620429 ZNF700Q9H0M5 742 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 SPACA6W5XKT8 324 aa9.05□□□□□ -0.96
VPS11-207ENST00000620429 MEGF11A6BM72 1044 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 NBL1P41271 181 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 GRK6P43250 576 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 BLKP51451 505 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 CTXN1P60606 82 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 RAB11AP62491 216 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 Q5PR19 223 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 CDC20BQ86Y33 519 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 CPT1CQ8TCG5 803 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 LIPHQ8WWY8 451 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 TSACCQ96A04 125 aaPredicted RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 APH1AQ96BI3 265 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 S1PR5Q9H228 398 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 BET1LQ9NYM9 111 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 CISD1Q9NZ45 108 aaKnown RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 SMPXQ9UHP9 88 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 TIAF1O95411 115 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 MMP9P14780 707 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 FAHP16930 419 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 ERVS71-1P61550 626 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 DGAT2L6Q6ZPD8 337 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 C16orf82Q7Z2V1 217 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 ZFP62Q8NB50 900 aaPredicted RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 OR1E3Q8WZA6 343 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 FAM46BQ96A09 425 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 TM4SF19Q96DZ7 209 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 OR5B12Q96R08 314 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 ABHD6Q9BV23 337 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 MRPL13Q9BYD1 178 aaKnown RBP9.04□□□□□ -0.96
VPS11-207ENST00000620429 WDR76Q9H967 626 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 CKLFQ9UBR5 152 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 BRWD1Q9NSI6 2320 aa9.04□□□□□ -0.96
VPS11-207ENST00000620429 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TRAPPC6AO75865 159 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 CSTAP01040 98 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 PI3P19957 117 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 ATP6V0CP27449 155 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 RBMXP38159 391 aaKnown RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 GALR1P47211 349 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 COMPP49747 757 aaPredicted RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 RPS4XP62701 263 aaKnown RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 ZNF266Q14584 549 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 NNATQ16517 81 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 WDR38Q5JTN6 314 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 OTPQ5XKR4 325 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 CSNK1A1LQ8N752 337 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 SCARF2Q96GP6 870 aaPredicted RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 P2RX4Q99571 388 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 CLN8Q9UBY8 286 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 MRPS16Q9Y3D3 137 aaKnown RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 PRSS38A1L453 326 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 OR5B21A6NL26 309 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 NUPR1O60356 82 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 HRASP01112 189 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 ESDP10768 282 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 MPLP40238 635 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TNFRSF4P43489 277 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 BIDP55957 195 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TPPP2P59282 170 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TCF15Q12870 199 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 ALG10Q5BKT4 473 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 LCN10Q6JVE6 187 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TMEM108Q6UXF1 575 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 Q6ZVH6 145 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 SFTPA2Q8IWL1 248 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 C20orf196Q8IYI0 205 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 EMG1Q92979 244 aaKnown RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 LYRM4Q9HD34 91 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 TUBG2Q9NRH3 451 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 CGGBP1Q9UFW8 167 aaPredicted RBP9.03□□□□□ -0.96
VPS11-207ENST00000620429 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 HEBP2Q9Y5Z4 205 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 CACNA1IQ9P0X4 2223 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 NSG1A0A0A6YYJ2 146 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 LILRA1O75019 489 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 DDAH2O95865 285 aa9.03□□□□□ -0.96
VPS11-207ENST00000620429 ALOX5APP20292 161 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms