RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 C3orf85A0A1B0GTC6 90 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 PQLC2LA1A4F0 135 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 C10orf142B7Z368 130 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 NDUFS6O75380 124 aaKnown RBP13.86□□□□□ -0.19
DKC1-213ENST00000620277 PPYP01298 95 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 IGKV1-13P0DP09 117 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 P2RY1P47900 373 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 UBE2KP61086 200 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 MSI2Q96DH6 328 aaKnown RBP13.86□□□□□ -0.19
DKC1-213ENST00000620277 TGIF2Q9GZN2 237 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 PLEKHA2Q9HB19 425 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 TUBD1Q9UJT1 453 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 STARD10Q9Y365 291 aa13.86□□□□□ -0.19
DKC1-213ENST00000620277 TGIF2-C20orf24A0A0A6YYL0 155 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 NPIPB13A6NJU9 1138 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 NPIPB4C9JG80 1138 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 IAPPP10997 89 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 BCL3P20749 454 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 LSM6P62312 80 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 FAM189A2Q15884 450 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 RPS19BP1Q86WX3 136 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 RBM7Q9Y580 266 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 CNOT1A5YKK6 2376 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 ARPC4-TTLL3A0A0A6YYG9 625 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 NUDT19A8MXV4 375 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 IFNA4P05014 189 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 TCN2P20062 427 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 EIF1P41567 113 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 RPS23P62266 143 aaKnown RBP13.85□□□□□ -0.19
DKC1-213ENST00000620277 SPATA46Q5T0L3 261 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 ZNF818PQ6ZRF7 136 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 SKA3Q8IX90 412 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 OR1K1Q8NGR3 316 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 RHBDD1Q8TEB9 315 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 TM2D1Q9BX74 207 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 GLRX2Q9NS18 164 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 GNG13Q9P2W3 67 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 USF3Q68DE3 2245 aa13.85□□□□□ -0.19
DKC1-213ENST00000620277 H3BQ15 152 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 CHST1O43916 411 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 TMEM50AO95807 157 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 ZNF133P52736 654 aaPredicted RBP13.84□□□□□ -0.19
DKC1-213ENST00000620277 RND3P61587 244 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 MPV17LQ2QL34 196 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 THNSL2Q86YJ6 484 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 OR5T1Q8NG75 326 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 SYT3Q9BQG1 590 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 BCO1Q9HAY6 547 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 C19orf25Q9UFG5 118 aaPredicted RBP13.84□□□□□ -0.19
DKC1-213ENST00000620277 A0A0U1RQV5 110 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 MPPED1O15442 326 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 EXTL1Q92935 676 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 RAB39BQ96DA2 213 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 SGCZQ96LD1 299 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 CHRNA10Q9GZZ6 450 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 KLK3P07288 261 aaPredicted RBP13.84□□□□□ -0.19
DKC1-213ENST00000620277 CXCL1P09341 107 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 LIFP15018 202 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 SSR4P51571 173 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 H3F3AP84243 136 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 PCOLCEQ15113 449 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 C3AR1Q16581 482 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 OR56B2PQ8NGI1 322 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 RHOVQ96L33 236 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 NUDT16L1Q9BRJ7 211 aaKnown RBP13.84□□□□□ -0.19
DKC1-213ENST00000620277 RSG1Q9BU20 258 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 SUCNR1Q9BXA5 334 aa13.84□□□□□ -0.19
DKC1-213ENST00000620277 CYB5BO43169 146 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 HEXAP06865 529 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 MMP9P14780 707 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 BMP5P22003 454 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 OR2B11Q5JQS5 317 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 FOXB1Q99853 325 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 CALHM2Q9HA72 323 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 PROK2Q9HC23 129 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 IGLV3-12A0A075B6K2 115 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 RAB11AP62491 216 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 CNN3Q15417 329 aaKnown RBP13.83□□□□□ -0.2
DKC1-213ENST00000620277 SURF2Q15527 256 aaPredicted RBP13.83□□□□□ -0.2
DKC1-213ENST00000620277 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.2
DKC1-213ENST00000620277 CADM4Q8NFZ8 388 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 OR1J1Q8NGS3 322 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 CPNE4Q96A23 557 aaPredicted RBP13.83□□□□□ -0.2
DKC1-213ENST00000620277 PBDC1Q9BVG4 233 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 HS3ST3B1Q9Y662 390 aa13.83□□□□□ -0.2
DKC1-213ENST00000620277 CHD3Q12873 2000 aaKnown RBP13.83□□□□□ -0.2
DKC1-213ENST00000620277 RBFOX3A6NFN3 312 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 ARGFXA6NJG6 315 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 NGFP01138 241 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 GAPDHP04406 335 aaKnown RBP13.82□□□□□ -0.2
DKC1-213ENST00000620277 SELEP16581 610 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 CPEB3Q8NE35 698 aaKnown RBP13.82□□□□□ -0.2
DKC1-213ENST00000620277 EDARADDQ8WWZ3 215 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 SCRT1Q9BWW7 348 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 PROB1E7EW31 1015 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 UMODP07911 640 aa13.82□□□□□ -0.2
DKC1-213ENST00000620277 SEC11BP0C7V7 166 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms