RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 VAMP1P23763 118 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 PMELP40967 661 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 NUTF2P61970 127 aaKnown RBP16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 PDCD1Q15116 288 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 NSUN5P2Q63ZY6 315 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 ADAD2Q8NCV1 583 aaKnown RBP16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 HAS2Q92819 552 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 PARPBPQ9NWS1 579 aa16.77■□□□□ 0.28
LAPTM4B-204ENST00000619747 IGKV1-27A0A075B6S5 117 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF503-AS2A6NEH8 195 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR6C6A6NF89 314 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 GALR2O43603 387 aaPredicted RBP16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 MED6O75586 246 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 FTH1P19P0C7X4 201 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 CCL11P51671 97 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 ACTBL2Q562R1 376 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR56B1Q8NGI3 324 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 MARCH1Q8TCQ1 289 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 PIGCQ92535 297 aa16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 MCTS1Q9ULC4 181 aaKnown RBP16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 NOP16Q9Y3C1 178 aaKnown RBP16.77■□□□□ 0.27
LAPTM4B-204ENST00000619747 AKAP13Q12802 2813 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 M0R036 132 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 RIPPLY2Q5TAB7 128 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 SECTM1Q8WVN6 248 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 ASB13Q8WXK3 278 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 HDHD3Q9BSH5 251 aaPredicted RBP16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 FAM86C1Q9NVL1 165 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 NPY4RP50391 375 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 TAF9Q16594 264 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 PRRT1Q99946 306 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR51B6Q9H340 312 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 FBLN5Q9UBX5 448 aa16.76■□□□□ 0.27
LAPTM4B-204ENST00000619747 WISP2O76076 250 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 PPP1R1AQ13522 171 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 MEF2DQ14814 521 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 SLC10A1Q14973 349 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 NUFIP2Q7Z417 695 aaKnown RBP16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 CCDC107Q8WV48 283 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF701Q9NV72 531 aaPredicted RBP16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 KLRC4-KLRK1H3BQV0 150 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 DNAJB11Q9UBS4 358 aa16.75■□□□□ 0.27
LAPTM4B-204ENST00000619747 A0A1W2PPE2 198 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 MMP7P09237 267 aaPredicted RBP16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 CD34P28906 385 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 KCTD9Q7L273 389 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 PRR13Q9NZ81 148 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 LPAR3Q9UBY5 353 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 KLF13Q9Y2Y9 288 aaPredicted RBP16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 DCHS1Q96JQ0 3298 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 C5orf49A4QMS7 147 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 MFNGO00587 321 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 NME2P1O60361 137 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF205O95201 554 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 NRASP01111 189 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 IFNA10P01566 189 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 IFNA17P01571 189 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 ID4P47928 161 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 FAM3AP98173 230 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 LBHQ53QV2 105 aaPredicted RBP16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 MCEMP1Q8IX19 187 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 MDS2Q8NDY4 140 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 SLC30A7Q8NEW0 376 aa16.74■□□□□ 0.27
LAPTM4B-204ENST00000619747 SCGNO76038 276 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 CSTBP04080 98 aaKnown RBP16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 CD46P15529 392 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 PCBD1P61457 104 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 IL13RA1P78552 427 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 BORCS8Q96FH0 119 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 KIRREL1Q96J84 757 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 PLEKHJ1Q9NW61 149 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 DOK5Q9P104 306 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 GSTP1P09211 210 aaKnown RBP16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 AMY2BP19961 511 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF766Q5HY98 468 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF100Q8IYN0 542 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 DYRK2Q92630 601 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR2S2Q9NQN1 319 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 PRSS50Q9UI38 385 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 MED12LQ86YW9 2145 aa16.73■□□□□ 0.27
LAPTM4B-204ENST00000619747 FAM221AA4D161 298 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 SOX15O60248 233 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 CD5P06127 495 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 WT1P19544 449 aaPredicted RBP16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 SNU13P55769 128 aaKnown RBP16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 GFI1BQ5VTD9 330 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 APH1AQ96BI3 265 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 PECRQ9BY49 303 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 RPS10P46783 165 aaKnown RBP16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR2A2Q6IF42 318 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 BHLHE23Q8NDY6 225 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 CSNK2A3Q8NEV1 391 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 FAAP24Q9BTP7 215 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 METTL9Q9H1A3 318 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF552Q9H707 407 aaPredicted RBP16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 IGKV3D-15A0A087WSY6 115 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 IGKV1D-8A0A087WSZ0 117 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 MARCH11A6NNE9 402 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 EEF1E1-BLOC1S5C9J1V9 151 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 F8VVB4 439 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms