RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 HCKP08631 526 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 OPN1MW2P0DN77 364 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 OPN1MW3P0DN78 364 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 CD28P10747 220 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF44P15621 663 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 HTR1DP28221 377 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 GTF2A1P52655 376 aaPredicted RBP17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 SMN1Q16637 294 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 LPCAT4Q643R3 524 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF529Q6P280 563 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 SERPINA12Q8IW75 414 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 ABHD12Q8N2K0 398 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 OR5AK2Q8NH90 309 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 WNT10AQ9GZT5 417 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 PPIL3Q9H2H8 161 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 GAL3ST2Q9H3Q3 398 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 TAS2R3Q9NYW6 316 aa17.83■□□□□ 0.44
NEDD4L-237ENST00000617539 WBP4O75554 376 aaKnown RBP17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 TMEM225BP0DP42 221 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 BDH1Q02338 343 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 ATXN7L3Q14CW9 347 aaPredicted RBP17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 TMEM95Q3KNT9 176 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF691Q5VV52 312 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 XAF1Q6GPH4 301 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 DTX3Q8N9I9 347 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 OR51A2Q8NGJ7 313 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 OR5D14Q8NGL3 314 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF286AQ9HBT8 521 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 DHDHQ9UQ10 334 aa17.82■□□□□ 0.44
NEDD4L-237ENST00000617539 ADARB2-AS1A8MUL3 147 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 G3V4G9 280 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 FBXO24O75426 580 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 CCDC159P0C7I6 412 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 CD34P28906 385 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 GBX2P52951 348 aaPredicted RBP17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 MRPL28Q13084 256 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 C17orf58Q2M2W7 97 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 KRBOX4Q5JUW0 171 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 CHST4Q8NCG5 386 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 TSEN15Q8WW01 171 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 OR5M11Q96RB7 305 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 MYCBPQ99417 103 aaPredicted RBP17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 JAM3Q9BX67 310 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 PRSS22Q9GZN4 317 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 ING3Q9NXR8 418 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 RPL36Q9Y3U8 105 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 PCDHGB5Q9Y5G0 923 aa17.81■□□□□ 0.44
NEDD4L-237ENST00000617539 FUOMA2VDF0 154 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 GABRPO00591 440 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 CD24P25063 80 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 ELP2Q6IA86 826 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 OR52W1Q6IF63 320 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 C10orf67Q8IYJ2 551 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 FGF20Q9NP95 211 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 DPM3Q9P2X0 92 aa17.8■□□□□ 0.44
NEDD4L-237ENST00000617539 DEGS1O15121 323 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 RPSAP08865 295 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 CGB3P0DN86 165 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 CGB7P0DN87 165 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 PTGFRP43088 359 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 SOX2P48431 317 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 MTNR1BP49286 362 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 ETV1P50549 477 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 ZSCAN26Q16670 478 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 BEAN1Q3B7T3 259 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 NSUN5P1Q3KNT7 163 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 RTN4RL2Q86UN3 420 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 OR51T1Q8NGJ9 327 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF596Q8TC21 504 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 CITED2Q99967 270 aaPredicted RBP17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 OCSTAMPQ9BR26 566 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 TAS2R4Q9NYW5 299 aa17.79■□□□□ 0.44
NEDD4L-237ENST00000617539 A0A087X0M5 115 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 TRAV24A0A0B4J272 114 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 A0A1B0GX30 115 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 H0YJX3 145 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 LY6LH3BQJ8 138 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 HSPB6O14558 160 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 KLHL22Q53GT1 634 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 SAMD5Q5TGI4 173 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF581Q9P0T4 197 aa17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 SIRT4Q9Y6E7 314 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-237ENST00000617539 ZNF729A6NN14 1252 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 RAB3AP20336 220 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 HLA-DRB5Q30154 266 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 KPRPQ5T749 579 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 OR2G6Q5TZ20 316 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 Q8NFD4 153 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 OR10K1Q8NGX5 313 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 CNIH3Q8TBE1 160 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 TNFAIP8L1Q8WVP5 186 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 KIRREL1Q96J84 757 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 NR1H4Q96RI1 486 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 MMP28Q9H239 520 aa17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 SMPD3Q9NY59 655 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-237ENST00000617539 BUB1B-PAK6H3BSN5 160 aa17.76■□□□□ 0.43
NEDD4L-237ENST00000617539 CLIC3O95833 236 aa17.76■□□□□ 0.43
NEDD4L-237ENST00000617539 VDAC2P45880 294 aaPredicted RBP17.76■□□□□ 0.43
NEDD4L-237ENST00000617539 PIGYQ3MUY2 71 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms