RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LOC102723996A0A087X1L8 192 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 A0A0A6YYD4 124 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 FCGR2CP31995 323 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 ASCL1P50553 236 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 SCAND1P57086 179 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 NMES1Q9C002 83 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 KCNJ16Q9NPI9 418 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 RCL1Q9Y2P8 373 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 FLVCR1Q9Y5Y0 555 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 CASP6P55212 293 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 NSUN5P2Q63ZY6 315 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 SULF2Q8IWU5 870 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 ARRDC1Q8N5I2 433 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 FAAP24Q9BTP7 215 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 ADGRG4Q8IZF6 3080 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 MEOX1P50221 254 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 OIT3Q8WWZ8 545 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 REEP6Q96HR9 211 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
SHROOM1-208ENST00000617339 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 A6NJ64 397 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 IFITM10A6NMD0 228 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 K7EPK0 472 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 CDX4O14627 284 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 WISP2O76076 250 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 HLA-GP17693 338 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 RPL12P30050 165 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 TMEM50BP56557 158 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 FAM71E2Q8N5Q1 922 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 UBALD1Q8TB05 177 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 PSMF1Q92530 271 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 SPTSSAQ969W0 71 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 POM121Q96HA1 1249 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 FOXB1Q99853 325 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 LPAR5Q9H1C0 372 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 EHFQ9NZC4 300 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 DOK5Q9P104 306 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 SULT1A2P50226 295 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 FAM166AQ6J272 317 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 DEGS2Q6QHC5 323 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 OR2V1Q8NHB1 315 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 PNRC2Q9NPJ4 139 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 C5orf49A4QMS7 147 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 CDC14BO60729 498 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 DKK1O94907 266 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 RAC3P60763 192 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 PNLIPRP3Q17RR3 467 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 FAM180AQ6UWF9 173 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 GTF3AQ92664 365 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 UNKLQ9H9P5 680 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 ZDHHC8Q9ULC8 765 aa12.56□□□□□ -0.4
SHROOM1-208ENST00000617339 LRRC3CA6NJW4 275 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 G0S2P27469 103 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 HOXA6P31267 233 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 UBE2NP61088 152 aaKnown RBP12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 EIF5AP63241 154 aaKnown RBP12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 DOK3Q7L591 496 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 NKAIN3Q8N8D7 197 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 TMEM230Q96A57 120 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 ZPBPQ9BS86 351 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 OR10A2Q9H208 303 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 SLC7A10Q9NS82 523 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 B4E171 279 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 ISG15P05161 165 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 TSPAN7P41732 249 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 TMEM33P57088 247 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 H3F3AP84243 136 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 PSG4Q00888 419 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 TERB2Q8NHR7 220 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 AQP3Q92482 292 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 TRIB1Q96RU8 372 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 FAM208BQ5VWN6 2430 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 A0A087X0M5 115 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 A0A1B0GX30 115 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 FABP4P15090 132 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 SOX8P57073 446 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 KCNG3Q8TAE7 436 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
SHROOM1-208ENST00000617339 ZNF292O60281 2723 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms