RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TGIF2LYQ8IUE0 185 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 DEFB106AQ8N104 65 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 OR52E1Q8NGJ3 308 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 NEIL2Q969S2 332 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 LPAR5Q9H1C0 372 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 OR52D1Q9H346 318 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 MRPS33Q9Y291 106 aaKnown RBP13.39□□□□□ -0.27
NOP56-220ENST00000616692 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
NOP56-220ENST00000616692 SPTY2D1-AS1A0A0U1RR47 76 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 hCG_38984A0A1B0GV85 526 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 H0YIZ8 118 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 K7ESM1 405 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 IGLC1P0CG04 106 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 MMP9P14780 707 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 AMD1P17707 334 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 GATA3P23771 443 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 YPEL5P62699 121 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 NR0B2Q15466 257 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 Q6ZWC4 215 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 ZNF683Q8IZ20 524 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 PNKDQ8N490 385 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 ISG20L2Q9H9L3 353 aaKnown RBP13.38□□□□□ -0.27
NOP56-220ENST00000616692 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
NOP56-220ENST00000616692 UBE2J1Q9Y385 318 aaPredicted RBP13.38□□□□□ -0.27
NOP56-220ENST00000616692 OR2T8A6NH00 312 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 FIGNL2A6NMB9 653 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 K7ENP7 123 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 RHOCP08134 193 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 LYL1P12980 280 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
NOP56-220ENST00000616692 EGR4Q05215 589 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 TMEM267Q0VDI3 215 aaPredicted RBP13.38□□□□□ -0.27
NOP56-220ENST00000616692 OR13H1Q8NG92 308 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 CTDSP1Q9GZU7 261 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 TRIM36Q9NQ86 728 aa13.38□□□□□ -0.27
NOP56-220ENST00000616692 FAM166BA8MTA8 275 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 RAB40ALP0C0E4 278 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 F3P13726 295 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 PPOXP50336 477 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 CLDN6P56747 220 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 C5orf47Q569G3 176 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 Q6ZSR6 202 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 NEGR1Q7Z3B1 354 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 LINC00471Q8N535 108 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 C2orf73Q8N5S3 287 aaPredicted RBP13.37□□□□□ -0.27
NOP56-220ENST00000616692 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 LINC00470Q9BZP3 86 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 NMES1Q9C002 83 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 IGHV2-26A0A0B4J1V2 119 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 DANCRP0C864 163 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 CDK2P24941 298 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 FZD2Q14332 565 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 NPEPL1Q8NDH3 523 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 NPY6RQ99463 290 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 RARRES2Q99969 163 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 DERL1Q9BUN8 251 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 RSPO3Q9BXY4 272 aaPredicted RBP13.37□□□□□ -0.27
NOP56-220ENST00000616692 CHST8Q9H2A9 424 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 A4GALTQ9NPC4 353 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
NOP56-220ENST00000616692 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
NOP56-220ENST00000616692 CD22P20273 847 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 HLA-DRB3P79483 266 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 ZNF266Q14584 549 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 TMEM37Q8WXS4 190 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 LIN37Q96GY3 246 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 BMFQ96LC9 184 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 DERL3Q96Q80 235 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 PYGO2Q9BRQ0 406 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 B4GALT6Q9UBX8 382 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 COL27A1Q8IZC6 1860 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 SLC31A1O15431 190 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 KLK8O60259 260 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 CNN1P51911 297 aaKnown RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 ZNF880Q6PDB4 577 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 ZNF621Q6ZSS3 439 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 SLC22A18ASQ8N1D0 253 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 SYNPRQ8TBG9 265 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 MAL2Q969L2 176 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 GPR39O43194 453 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 GAPDHP04406 335 aaKnown RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 SRP19P09132 144 aaKnown RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 CD33P20138 364 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 AK4P27144 223 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 CDKN1AP38936 164 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 PIGPP57054 158 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 FAM3BP58499 235 aaPredicted RBP13.36□□□□□ -0.27
NOP56-220ENST00000616692 PFN3P60673 137 aa13.36□□□□□ -0.27
NOP56-220ENST00000616692 CYCSP99999 105 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms