RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 LPAR6P43657 344 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 PMP22Q01453 160 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 FOXRED2Q8IWF2 684 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 FBXL14Q8N1E6 418 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 FGFBP3Q8TAT2 258 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 MARS2Q96GW9 593 aaKnown RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 PRDM14Q9GZV8 571 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RHOFQ9HBH0 211 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 TNRC6AQ8NDV7 1962 aaKnown RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 PDCD6O75340 191 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 FCGR2CP31995 323 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 C3AR1Q16581 482 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RNFT1Q5M7Z0 435 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 SKA3Q8IX90 412 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 UBAC2Q8NBM4 344 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 NRIP2Q9BQI9 281 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 HRH4Q9H3N8 390 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 SLC2A9Q9NRM0 540 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
CDH1-213ENST00000612417 ST3GAL6Q9Y274 331 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 POMT1Q9Y6A1 747 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 TRGV5A0A0B4J1U4 118 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 H7C1Q1 480 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 MED6O75586 246 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 OR5AC1P0C628 307 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 EDN3P14138 238 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 TMEM33P57088 247 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 TMEM211Q6ICI0 200 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 BTNL8Q6UX41 500 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 Q8NFD4 153 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 C18orf12Q96KH6 178 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 ARV1Q9H2C2 271 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 ZFP57Q9NU63 452 aa12.65□□□□□ -0.38
CDH1-213ENST00000612417 E5RGE8 158 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.39
CDH1-213ENST00000612417 PRSS12P56730 875 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 MALLQ13021 153 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 HFEQ30201 348 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 PLCXD3Q63HM9 321 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 SLC22A25Q6T423 547 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 IGFL2Q6UWQ7 119 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 COLCA1Q6ZS62 124 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.65□□□□□ -0.39
CDH1-213ENST00000612417 NSG2Q9Y328 171 aa12.65□□□□□ -0.39
CDH1-213ENST00000612417 DCHS1Q96JQ0 3298 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 FARS2O95363 451 aaKnown RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 MBPP02686 304 aaPredicted RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 CD5P06127 495 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 F2RL1P55085 397 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 DYRK2Q92630 601 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 MSI2Q96DH6 328 aaKnown RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 SYT3Q9BQG1 590 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 RSRP1Q9BUV0 290 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
CDH1-213ENST00000612417 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A10PA6NDY2 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A20PA6NIJ5 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A8PA6NJQ4 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A7PA6NKC0 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A22PA8MWA6 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A12PA8MX19 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A5PA8MXJ8 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A23PA8MXZ1 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A15PP0C7V4 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A13PP0C7W8 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A14PP0C7W9 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FAM90A24PP0C7X0 464 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FUT3P21217 361 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 Q6ZPA2 131 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 Q6ZS49 121 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 SNIP1Q8TAD8 396 aaKnown RBP12.63□□□□□ -0.39
CDH1-213ENST00000612417 C12orf57Q99622 126 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 LINC00470Q9BZP3 86 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 CALHM2Q9HA72 323 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 PARPBPQ9NWS1 579 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 LAMA5O15230 3695 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms