RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MTORP42345 2549 aa7.46□□□□□ -1.22
SMAD4-217ENST00000611848 TANC2Q9HCD6 1990 aa7.46□□□□□ -1.22
SMAD4-217ENST00000611848 A0A0A6YYD4 124 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 hCG_38984A0A1B0GV85 526 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 A0A1B0GWJ7 208 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 UBE2QL1A1L167 161 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 DHRS7CA6NNS2 312 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 H7C1Q1 480 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 M0QYG6 137 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SSX5O60225 188 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 CDC14BO60729 498 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SNAPC5O75971 98 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 HCKP08631 526 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 COL8A2P25067 703 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR3A4PP47883 348 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TNFAIP6P98066 277 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 FAM3AP98173 230 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 LGALSLQ3ZCW2 172 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TRAPPC6BQ86SZ2 158 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 FTMTQ8N4E7 242 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 FAM89BQ8N5H3 189 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 BHLHE23Q8NDY6 225 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM104Q8NE00 496 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 CSNK2A3Q8NEV1 391 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR2Z1Q8NG97 314 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR56B2PQ8NGI1 322 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR52B4Q8NGK2 314 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR2T35Q8NGX2 323 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 C18orf12Q96KH6 178 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SPACA5Q96QH8 159 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 HEXA-AS1Q9H8Q6 139 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.45□□□□□ -1.221e-7■■□□□ 12.7
SMAD4-217ENST00000611848 IGHV1-69-2A0A0G2JMI3 117 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 ANKRD30BLA7E2S9 258 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 FOXI3A8MTJ6 420 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 VWC2LB2RUY7 222 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 DISC1C4P0D8 188 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 LYNX1G3V0Z9 82 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 AMY2AP04746 511 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 RLN1P04808 185 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 FCER2P06734 321 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 LYNX1P0DP58 116 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 GNB3P16520 340 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 NAT1P18440 290 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TBPP20226 339 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 PTGFRP43088 359 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM50BP56557 158 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 MZT1Q08AG7 82 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 IKZF1Q13422 519 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR8B8Q15620 311 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 KISS1Q15726 138 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 MPPED2Q15777 294 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 UBE2V2Q15819 145 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 PNLIPRP3Q17RR3 467 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 HFEQ30201 348 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 GFOD2Q3B7J2 385 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 PLAC9Q5JTB6 97 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 IDO2Q6ZQW0 420 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 MUC20Q8N307 709 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 BPIFB2Q8N4F0 458 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SPERTQ8NA61 448 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 CHST4Q8NCG5 386 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR2AK2Q8NG84 335 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR13C8Q8NGS7 320 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 ASB13Q8WXK3 278 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 OR2V2Q96R30 315 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SLC6A7Q99884 636 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 PRRT1Q99946 306 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 NICN1Q9BSH3 213 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TMPRSS13Q9BYE2 586 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SELENOIQ9C0D9 397 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 CHST6Q9GZX3 395 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMAD4-217ENST00000611848 SLC23A1Q9UHI7 598 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 KCNK7Q9Y2U2 307 aa7.45□□□□□ -1.22
SMAD4-217ENST00000611848 TMEM82A0PJX8 343 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 RNF223E7ERA6 249 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 H3BUI4 141 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 IFNL4K9M1U5 179 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 MLNRO43193 412 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 LILRA1O75019 489 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 RP2O75695 350 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 RGS11O94810 467 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 MPIG6BO95866 241 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 HIST1H1DP16402 221 aaKnown RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 FAHP16930 419 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 GPR6P46095 362 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 RPS27AP62979 156 aaKnown RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 LOXL1Q08397 574 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 OR8G1Q15617 311 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 RNASE10Q5GAN6 216 aaKnown RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 ATPAF1Q5TC12 328 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
SMAD4-217ENST00000611848 UXS1Q8NBZ7 420 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 OR4S1Q8NGB4 309 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 OR10AD1Q8NGE0 317 aa7.44□□□□□ -1.22
SMAD4-217ENST00000611848 OR56B1Q8NGI3 324 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms