RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 FAM24BQ8N5W8 94 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 SLX1AQ9BQ83 275 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 POMT1Q9Y6A1 747 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 KIF26AQ9ULI4 1882 aaPredicted RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 CNOT1A5YKK6 2376 aaKnown RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 CRYM-AS1A6NIL9 109 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 C1QL1O75973 258 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 MBPP02686 304 aaPredicted RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 CRYBA1P05813 215 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 ZNF708P17019 499 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 ID4P47928 161 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 TESK1Q15569 626 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 OR8G1Q15617 311 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 C3AR1Q16581 482 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 IGSF11Q5DX21 431 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 HIST2H3AQ71DI3 136 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 EIF4E3Q8N5X7 224 aaKnown RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 RNF166Q96A37 237 aaPredicted RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 SDSLQ96GA7 329 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 RNF126Q9BV68 326 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 GNG12Q9UBI6 72 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 A0A1W2PR80 420 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 LRP5LA4QPB2 252 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 CDRT15L2A8MXV6 281 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 H0YIZ8 118 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 SH2D1BO14796 132 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 ZIC3O60481 467 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 ACKR3P25106 362 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 AWAT1Q58HT5 328 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 CCL28Q9NRJ3 127 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 CACNA1DQ01668 2161 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 SLC22A20A6NK97 555 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 TNFSF15O95150 251 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 ACTL6AO96019 429 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 MAGEA5P43359 124 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 CCL11P51671 97 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 ERVK-16P61578 105 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 EDDM3AQ14507 147 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
LIG4-204ENST00000611712 ADAMTS17Q8TE56 1095 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 SLC39A7Q92504 469 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 TMEM230Q96A57 120 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 PSENENQ9NZ42 101 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 KIAA1549LQ6ZVL6 1849 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 GAPDHP04406 335 aaKnown RBP7.54□□□□□ -1.2
LIG4-204ENST00000611712 ARG1P05089 322 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 SEC11BP0C7V7 166 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 VDAC1P21796 283 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 MPLP40238 635 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 KCNJ3P48549 501 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 EWSR1Q01844 656 aaKnown RBP eCLIP7.54□□□□□ -1.26e-11■■■■■ 40.6
LIG4-204ENST00000611712 BAXQ07812 192 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 HIST2H3PS2Q5TEC6 136 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 ZNF468Q5VIY5 522 aaPredicted RBP7.54□□□□□ -1.2
LIG4-204ENST00000611712 RBMS3Q6XE24 437 aaKnown RBP7.54□□□□□ -1.2
LIG4-204ENST00000611712 C1orf210Q8IVY1 113 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 DUSP13Q9UII6 198 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 HSF4Q9ULV5 492 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 DNAJC13O75165 2243 aa7.54□□□□□ -1.2
LIG4-204ENST00000611712 IGLV3-32A0A0A0MS00 114 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 SRSF10O75494 262 aaKnown RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 CDS2O95674 445 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 FAM3AP98173 230 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 LYZL4Q96KX0 146 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 FAM234AQ9H0X4 552 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 ESRP2Q9H6T0 727 aaKnown RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 MMP24Q9Y5R2 645 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 AUP1Q9Y679 476 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 V9GYS6 101 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 EP300Q09472 2414 aaPredicted RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 C2orf16Q68DN1 1984 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 TRAV39A0A0B4J263 110 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 A0A1W2PPV4 95 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 TRDCB7Z8K6 153 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 CHST1O43916 411 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 SPP1P10451 314 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 NAT2P11245 290 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 MPZP25189 248 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 TMEM267Q0VDI3 215 aaPredicted RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 DEFB123Q8N688 67 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 GPHA2Q96T91 129 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 OPA3Q9H6K4 179 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
LIG4-204ENST00000611712 WSB1Q9Y6I7 421 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 R4GN57 208 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 C5orf63A6NC05 138 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 RPL36A-HNRNPH2H7BZ11 118 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 CA11O75493 328 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 IFNA4P05014 189 aa7.53□□□□□ -1.2
LIG4-204ENST00000611712 RFPL3SP0C7P2 107 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms