RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 ZNF705AQ6ZN79 300 aaPredicted RBP10.88□□□□□ -0.67
CDH1-212ENST00000611625 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.88□□□□□ -0.67
CDH1-212ENST00000611625 OR10D4PQ8NGN7 298 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 VWCEQ96DN2 955 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 PIPOXQ9P0Z9 390 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 TRGV5A0A0B4J1U4 118 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 TRDCB7Z8K6 153 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 DNPH1O43598 174 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 LPAR6P43657 344 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 UBE2G2P60604 165 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 SSPNQ14714 243 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 S1PR3Q99500 378 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 AP4M1O00189 453 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 ENSAO43768 121 aaKnown RBP10.88□□□□□ -0.67
CDH1-212ENST00000611625 CHST1O43916 411 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 NDUFB7P17568 137 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 SULT1A2P50226 295 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 P2RY4P51582 365 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
CDH1-212ENST00000611625 DEFB108BQ8NET1 73 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 H1FXQ92522 213 aaKnown RBP10.88□□□□□ -0.67
CDH1-212ENST00000611625 SLC2A8Q9NY64 477 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 MPC1Q9Y5U8 109 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 NPTNQ9Y639 398 aa10.88□□□□□ -0.67
CDH1-212ENST00000611625 CRYAAP02489 173 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 MPGP29372 298 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 HLA-DRB3P79483 266 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 FAM27BQ5VT28 67 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 CISD2Q8N5K1 135 aaKnown RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 CORO2AQ92828 525 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 TMEM18Q96B42 140 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 A0A0J9YW62 118 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 APOA2P02652 100 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 FCGR3AP08637 254 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 MDH2P40926 338 aaKnown RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 SULT1A1P50225 295 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 CXorf67Q86X51 503 aaPredicted RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 FAM210BQ96KR6 192 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 ARRDC1-AS1Q9H2J1 176 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 GPR35Q9HC97 309 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 MTCH1Q9NZJ7 389 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 PROCRQ9UNN8 238 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 EPOPA6NHQ4 379 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 ZNF98A6NK75 572 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 WDR54Q9H977 334 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 A0A1W2PNV4 684 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 PHOX2AO14813 284 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 CD8AP01732 235 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 IGHMP01871 453 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 SPINK2P20155 84 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 HNF1AP20823 631 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
CDH1-212ENST00000611625 OR2A2Q6IF42 318 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 LRRC75AQ8NAA5 344 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 ABHD3Q8WU67 409 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 ATP5SQ99766 215 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 SOX7Q9BT81 388 aa10.87□□□□□ -0.67
CDH1-212ENST00000611625 ZNF320A2RRD8 509 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 TMEM14DPA8MWL7 114 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 SYNGR2O43760 224 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 HEXAP06865 529 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 FABP4P15090 132 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 CTRB1P17538 263 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 RAB5AP20339 215 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 BCL3P20749 454 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 ZNF154Q13106 437 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 ANKRD55Q3KP44 614 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 BTNL8Q6UX41 500 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 ZADH2Q8N4Q0 377 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 ARHGEF17Q96PE2 2063 aaPredicted RBP10.86□□□□□ -0.67
CDH1-212ENST00000611625 A0A1W2PPE2 198 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 A0A1W2PR80 420 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 CYTIPO60759 359 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
CDH1-212ENST00000611625 FOXO1Q12778 655 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 MPV17LQ2QL34 196 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 TIGITQ495A1 244 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 C5orf66Q9H5L9 145 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 LRRC30A6NM36 301 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 TRAF3IP2O43734 574 aaPredicted RBP10.86□□□□□ -0.67
CDH1-212ENST00000611625 FGF8P55075 233 aaPredicted RBP10.86□□□□□ -0.67
CDH1-212ENST00000611625 RFESDQ8TAC1 157 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 PLPPR2Q96GM1 343 aa10.86□□□□□ -0.67
CDH1-212ENST00000611625 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
CDH1-212ENST00000611625 TCFL5Q9UL49 500 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms