RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TGIF2Q9GZN2 237 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CCL28Q9NRJ3 127 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 RIF1Q5UIP0 2472 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CHST1O43916 411 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 DEDDO75618 318 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 LIFP15018 202 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 PPP1CCP36873 323 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 GABRA2P47869 451 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 DYNLT3P51808 116 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 EWSR1Q01844 656 aaKnown RBP eCLIP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF154Q13106 437 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 EDDM3AQ14507 147 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ACER2Q5QJU3 275 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ADAMTS17Q8TE56 1095 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF488Q96MN9 340 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 SPSB2Q99619 263 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 PARP11Q9NR21 331 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 C5orf42Q9H799 3197 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 IGKV1D-8A0A087WSZ0 117 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 SCAF4O95104 1147 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CER1O95813 267 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 KRASP01116 189 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 PRF1P14222 555 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ATP6V0CP27449 155 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 C3AR1Q16581 482 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CXorf66Q5JRM2 361 aaPredicted RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CXorf67Q86X51 503 aaPredicted RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 EIF4E3Q8N5X7 224 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 OR10AD1Q8NGE0 317 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A1W2PPV4 95 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 RAB5AP20339 215 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 CA6P23280 308 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 PSG4Q00888 419 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 IL13RA2Q14627 380 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 IZUMO4Q1ZYL8 232 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 SSX9Q7RTT3 188 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 C15orf54Q8N8G6 183 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 OR10D4PQ8NGN7 298 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 CABLES2Q9BTV7 478 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 PCED1AQ9H1Q7 454 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 PSENENQ9NZ42 101 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 STARD10Q9Y365 291 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 AUP1Q9Y679 476 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 KIAA1671Q9BY89 1806 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A1W2PNV4 684 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 RBFOX3A6NFN3 312 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 TERTO14746 1132 aaKnown RBP5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 LDLRAD4O15165 306 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 SOX15O60248 233 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 SERPINA7P05543 415 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 CTXN2P0C2S0 81 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 BCL3P20749 454 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 BMP5P22003 454 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 ACKR3P25106 362 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 TGFBR3Q03167 851 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 C6orf15Q6UXA7 325 aaPredicted RBP5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 OR4A4PQ8NGN8 299 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 KCNE4Q8WWG9 221 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 MRPL13Q9BYD1 178 aaKnown RBP5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 TOLLIPQ9H0E2 274 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 TMEM38BQ9NVV0 291 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 GFOD1Q9NXC2 390 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 GNG12Q9UBI6 72 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 CACNG5Q9UF02 275 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 MIOXQ9UGB7 285 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 OSGIN2Q9Y236 505 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 LRRK1Q38SD2 2015 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 POLEQ07864 2286 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 ALPK3Q96L96 1907 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A0U1RQV5 110 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 LOC390937A0A1W2PQ73 354 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 SCTP09683 121 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 NPBWR2P48146 333 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 MLF1P58340 268 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 MSMO1Q15800 293 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 MPV17LQ2QL34 196 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 RNF212Q495C1 297 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 PHYHD1Q5SRE7 291 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 FAM27BQ5VT28 67 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 HPSE2Q8WWQ2 592 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 RNF166Q96A37 237 aaPredicted RBP5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 FAM131CQ96AQ9 280 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 SSX3Q99909 188 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 RARRES2Q99969 163 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 OR2H1Q9GZK4 316 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 ENY2Q9NPA8 101 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 GPR27Q9NS67 375 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 DUSP13Q9UII6 198 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 LOXL2Q9Y4K0 774 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A0C4DFX4 3053 aa5.97□□□□□ -1.45
SYNPO2-206ENST00000610556 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 UBE2L5PA0A1B0GUS4 154 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 CRYM-AS1A6NIL9 109 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 IFNA10P01566 189 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 MDKP21741 143 aaPredicted RBP5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 P2RY1P47900 373 aa5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF816Q0VGE8 651 aaPredicted RBP5.96□□□□□ -1.45
SYNPO2-206ENST00000610556 IL11RAQ14626 422 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms