RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 LGALSLQ3ZCW2 172 aaPredicted RBP12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 SCARF2Q96GP6 870 aaPredicted RBP12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 TXN2Q99757 166 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 ZDBF2Q9HCK1 2354 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 G3V3Q6 166 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 TO15178 435 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 RPS4Y1P22090 263 aaKnown RBP12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 ADAD2Q8NCV1 583 aaKnown RBP12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 CTHRC1Q96CG8 243 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 SPAARA0A1B0GVQ0 90 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 ZMIZ1Q9ULJ6 1067 aa12.5□□□□□ -0.41
PCDHB16-201ENST00000609684 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 RAB7AP51149 207 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 DYRK2Q92630 601 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 MRPL24Q96A35 216 aaKnown RBP12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 SLC2A9Q9NRM0 540 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 TDRD6O60522 2096 aaKnown RBP12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 FAM90A27PA6NNH2 459 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 FABP9Q0Z7S8 132 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 GAPTQ8N292 157 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 TMEM230Q96A57 120 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 C7orf66A4D0T2 115 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 B4E171 279 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 TSPAN7P41732 249 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 CTDSP1Q9GZU7 261 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 NARFLQ9H6Q4 476 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 KLK13Q9UKR3 277 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 CHEK1O14757 476 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 NTF3P20783 257 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 BHLHA15Q7RTS1 189 aaPredicted RBP12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 CCL28Q9NRJ3 127 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 CA10Q9NS85 328 aa12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
PCDHB16-201ENST00000609684 J3QT63 122 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 RGS13O14921 159 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 AGFG2O95081 481 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 IFI6P09912 130 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 CTRB1P17538 263 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 CTRB2Q6GPI1 263 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 OR5D13Q8NGL4 314 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 HDHD3Q9BSH5 251 aaPredicted RBP12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 ZNF426Q9BUY5 554 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 FAM27BQ5VT28 67 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 VDAC1P21796 283 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 TTTY12Q9BZ98 90 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 TRBV5-5A0A0J9YX44 114 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 hADV38S2A0JD32 116 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 HAND1O96004 215 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 IGF2P01344 180 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 SP1P08047 785 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 ANKRD34CP0C6C1 535 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 PTX4Q96A99 478 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 MMP24Q9Y5R2 645 aa12.48□□□□□ -0.41
PCDHB16-201ENST00000609684 TRAV39A0A0B4J263 110 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 HFEQ30201 348 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 FBXW9Q5XUX1 488 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 HSD17B13Q7Z5P4 300 aaPredicted RBP12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 ONECUT1Q9UBC0 465 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 IGHV1-45A0A0A0MS14 117 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 IGLV1-36A0A0B4J1U3 117 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 FSTP19883 344 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 TMEM211Q6ICI0 200 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 KCNK17Q96T54 332 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 GVINP1Q7Z2Y8 2422 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 SYNGR2O43760 224 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 PMELP40967 661 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 ROM1Q03395 351 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 GAL3ST2Q9H3Q3 398 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 ZDHHC11Q9H8X9 412 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 IL24Q13007 206 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 CEBPEQ15744 281 aa12.47□□□□□ -0.41
PCDHB16-201ENST00000609684 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms