RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CBLN2Q8IUK8 224 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 ZNF547Q8IVP9 402 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 H1FOOQ8IZA3 346 aaPredicted RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 SPICQ8N5J4 248 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 TMEM161BQ8NDZ6 487 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 LHFPL5Q8TAF8 219 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 CASTOR1Q8WTX7 329 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 IFT81Q8WYA0 676 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 CLDN23Q96B33 292 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 TCEAL4Q96EI5 215 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 GALNT14Q96FL9 552 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 COL21A1Q96P44 957 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 NXF2Q9GZY0 626 aaKnown RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 UBE2ZQ9H832 354 aaPredicted RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 RHOFQ9HBH0 211 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 ACOT13Q9NPJ3 140 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 TRMT112Q9UI30 125 aaKnown RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 HHLA2Q9UM44 414 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 FAM32AQ9Y421 112 aaKnown RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 KLF12Q9Y4X4 402 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 ARID1AO14497 2285 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 LRP4O75096 1905 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 KDM5BQ9UGL1 1544 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CCDC144AA2RUR9 1427 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 RIMS2Q9UQ26 1411 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ARHGEF10O15013 1369 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ZBED9Q6R2W3 1325 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 IGSF9BQ9UPX0 1349 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 IGLV1-36A0A0B4J1U3 117 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 RFPL4AA6NLU0 287 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 HACD1B0YJ81 288 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ZNF878C9JN71 531 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 RFPL4AL1F8VTS6 287 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SMKR1H3BMG3 65 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 H7C0C1 242 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 K7EMT4 169 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 PSMD12O00232 456 aaPredicted RBP2.54□□□□□ -2
SMCHD1-213ENST00000609587 KPNA4O00629 521 aaPredicted RBP2.54□□□□□ -2
SMCHD1-213ENST00000609587 TAAR5O14804 337 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 DCTN3O75935 186 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SLC22A5O76082 557 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 APOC1P02654 83 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 OR8U9P0C7N5 309 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CISD3P0C7P0 127 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CT45A6P0DMU7 189 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CT45A5P0DMU8 189 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CT45A7P0DMV0 189 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 UGT2B7P16662 529 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 GGT1P19440 569 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 PMELP40967 661 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 TTPAP49638 278 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 UBE2E1P51965 193 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 UBE2NP61088 152 aaKnown RBP2.54□□□□□ -2
SMCHD1-213ENST00000609587 SP4Q02446 784 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SYCNQ0VAF6 134 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 IRF4Q15306 451 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 PSMD5Q16401 504 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 MAPK14Q16539 360 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 C4orf26Q17RF5 130 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ORMDL2Q53FV1 153 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 PYCR3Q53H96 274 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CT45A1Q5HYN5 189 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 FBXW9Q5XUX1 488 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 NIT1Q86X76 327 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 VKORC1L1Q8N0U8 176 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 DAW1Q8N136 415 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 WDR31Q8NA23 367 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 GATD1Q8NB37 220 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 OR5AR1Q8NGP9 310 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 CT45A3Q8NHU0 189 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 FRZBQ92765 325 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 TMEM230Q96A57 120 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SFRP2Q96HF1 295 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ADTRPQ96IZ2 230 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 UBE2E2Q96LR5 201 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 RILPQ96NA2 401 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 FOXC2Q99958 501 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SPNS1Q9H2V7 528 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 MIXL1Q9H2W2 232 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 WFDC1Q9HC57 220 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ZNF355PQ9NSJ1 428 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 MCUBQ9NWR8 336 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 RWDD2AQ9UIY3 292 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 FBXO5Q9UKT4 447 aa2.54□□□□□ -2
SMCHD1-213ENST00000609587 SYNMO15061 1565 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 ARAP1Q96P48 1450 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 MRC2Q9UBG0 1479 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 PIKFYVEQ9Y2I7 2098 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 CENPVL3A0A0U1RRI6 287 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 A0A1B0GW55 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 PRORSD1PA6NEY8 169 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 METTL15A6NJ78 407 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 F8W036 122 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 KCNK1O00180 336 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 EIF1BO60739 113 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 RDH16O75452 317 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 SNAP29O95721 258 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 LSM8O95777 96 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms