RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TMED9Q9BVK6 235 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 SLITRK2Q9H156 845 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ACOT13Q9NPJ3 140 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 SIRT7Q9NRC8 400 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ING4Q9UNL4 249 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
HDDC2-209ENST00000609477 POMT1Q9Y6A1 747 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 DSCAML1Q8TD84 2053 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 A0A1W2PPK0 400 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 SIRPB1O00241 398 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 SLC33A1O00400 549 aaPredicted RBP11.69□□□□□ -0.54
HDDC2-209ENST00000609477 ARL6IP5O75915 188 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 CDRT1O95170 752 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 HTR3BO95264 441 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 MAS1P04201 325 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 UCHL1P09936 223 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 SRMP19623 302 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 GABRA5P31644 462 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 DLX6P56179 175 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
HDDC2-209ENST00000609477 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 DEFB112Q30KQ8 113 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 HSD17B12Q53GQ0 312 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 CEACAM19Q7Z692 300 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 PHC2Q8IXK0 858 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 JAGN1Q8N5M9 183 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 OR4S1Q8NGB4 309 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 BARHL1Q9BZE3 327 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 CHST6Q9GZX3 395 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 TAS2R3Q9NYW6 316 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 ST3GAL6Q9Y274 331 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
HDDC2-209ENST00000609477 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 NPFFO15130 113 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 RNASE1P07998 156 aaKnown RBP11.68□□□□□ -0.54
HDDC2-209ENST00000609477 FBP1P09467 338 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 UBBP0CG47 229 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 CALCBP10092 127 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 CD37P11049 281 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 GALP22466 123 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 SNU13P55769 128 aaKnown RBP11.68□□□□□ -0.54
HDDC2-209ENST00000609477 RBM11P57052 281 aaKnown RBP11.68□□□□□ -0.54
HDDC2-209ENST00000609477 EMX1Q04741 257 aaPredicted RBP11.68□□□□□ -0.54
HDDC2-209ENST00000609477 SCN1BQ07699 218 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF273Q14593 569 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 RUSC1-AS1Q66K80 236 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 GLT8D1Q68CQ7 371 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 LDLRAD3Q86YD5 345 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 FCGR1BQ92637 280 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 GAL3ST2Q9H3Q3 398 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 SPACA1Q9HBV2 294 aa11.68□□□□□ -0.54
HDDC2-209ENST00000609477 MRPS28Q9Y2Q9 187 aaKnown RBP11.68□□□□□ -0.54
HDDC2-209ENST00000609477 MAGEA13PA6NCF6 341 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 CCL3L1P16619 93 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 MAP2K4P45985 399 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 PSMD7P51665 324 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 RPL15P61313 204 aaKnown RBP11.67□□□□□ -0.54
HDDC2-209ENST00000609477 SLC9A3R2Q15599 337 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 SLC22A6Q4U2R8 563 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
HDDC2-209ENST00000609477 AWAT2Q6E213 333 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 GLIPR1L1Q6UWM5 242 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 NR1H4Q96RI1 486 aaPredicted RBP11.67□□□□□ -0.54
HDDC2-209ENST00000609477 OR6C3Q9NZP0 311 aa11.67□□□□□ -0.54
HDDC2-209ENST00000609477 TRAV24A0A0B4J272 114 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 ODAMA1E959 279 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 RRP9O43818 475 aaKnown RBP11.66□□□□□ -0.54
HDDC2-209ENST00000609477 IGHV1-8P0DP01 117 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 SERPINA2P20848 420 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
HDDC2-209ENST00000609477 AESQ08117 197 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 INSL4Q14641 139 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 PIGYQ3MUY2 71 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 C1orf100Q5SVJ3 147 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 UBE2UQ5VVX9 321 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms