RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 PSMB6P28072 239 aa12.84□□□□□ -0.35
CCDC12-211ENST00000604367 RBMXP38159 391 aaKnown RBP12.84□□□□□ -0.35
CCDC12-211ENST00000604367 SP6Q3SY56 376 aa12.84□□□□□ -0.35
CCDC12-211ENST00000604367 TMEM65Q6PI78 240 aa12.84□□□□□ -0.35
CCDC12-211ENST00000604367 SUMF2Q8NBJ7 301 aa12.84□□□□□ -0.35
CCDC12-211ENST00000604367 C1orf162Q8NEQ5 155 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-211ENST00000604367 MBD3L2Q8NHZ7 208 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-211ENST00000604367 ZNF71Q9NQZ8 489 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-211ENST00000604367 DLL1O00548 723 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 GRPP07492 148 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 SCTP09683 121 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 SLC25A4P12235 298 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.35
CCDC12-211ENST00000604367 PMELP40967 661 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 GLP1RP43220 463 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 POM121Q96HA1 1249 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.35
CCDC12-211ENST00000604367 NMES1Q9C002 83 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 PKIBQ9C010 78 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 PLK3Q9H4B4 646 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 OBP2BQ9NPH6 170 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 TINAGQ9UJW2 476 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 FAM215AQ9Y5M1 114 aa12.83□□□□□ -0.35
CCDC12-211ENST00000604367 A0A0B4J2A0 478 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 POM121CA8CG34 1229 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 J3QT63 122 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 BET1O15155 118 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 NAPSAO96009 420 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF44P15621 663 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 AADACP22760 399 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF154Q13106 437 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 Q9N2K0 584 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 SHPKQ9UHJ6 478 aa12.83□□□□□ -0.36
CCDC12-211ENST00000604367 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 RNF222A6NCQ9 220 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 LEUTXA8MZ59 168 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 EIF2S3P41091 472 aaKnown RBP12.82□□□□□ -0.36
CCDC12-211ENST00000604367 CYCSP99999 105 aaKnown RBP12.82□□□□□ -0.36
CCDC12-211ENST00000604367 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 BHLHA15Q7RTS1 189 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-211ENST00000604367 OR11L1Q8NGX0 322 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-211ENST00000604367 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 A0A0D9SG52 128 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 LRP5LA4QPB2 252 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 IQCF6A8MYZ5 107 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 PRSS44E7EML9 344 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 FABP6P51161 128 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 HERV-K104P61576 105 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 C20orf204Q6ZNR8 217 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 ACOT7LQ6ZUV0 252 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-211ENST00000604367 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 SCNM1Q9BWG6 230 aa12.82□□□□□ -0.36
CCDC12-211ENST00000604367 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 PPYP01298 95 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
CCDC12-211ENST00000604367 OR5AC1P0C628 307 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 P2RY6Q15077 328 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 OR8G1Q15617 311 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 KCNRGQ8N5I3 272 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 LINC00862A6NCI5 91 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 H0YIZ8 118 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 DEGS1O15121 323 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 OR2F2O95006 317 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 OR2F1Q13607 317 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 FAM76BQ5HYJ3 339 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 SLC51BQ86UW2 128 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 DHRS9Q9BPW9 319 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 RNF126Q9BV68 326 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
CCDC12-211ENST00000604367 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 OR5H1A6NKK0 313 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 PROB1E7EW31 1015 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 SIRPB1O00241 398 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 SLC34A2O95436 690 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 RLN2P04090 185 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 HOXA4Q00056 320 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 RBM39Q14498 530 aaKnown RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF345Q14585 488 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 LINC00596Q86U02 117 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 NAA60Q9H7X0 242 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 TMEM100Q9NV29 134 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 POLDIP2Q9Y2S7 368 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 CADP27708 2225 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 MLNRO43193 412 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 TIMM8AO60220 97 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 TK1P04183 234 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms