RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PDCD1Q15116 288 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 OR4S2Q8NH73 311 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 MTCH2Q9Y6C9 303 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 OR2W5A6NFC9 320 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 H3BMH7 237 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 TM4SF4P48230 202 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 RPL34P49207 117 aaKnown RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 DLK1P80370 383 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 CNTD2Q9H8S5 307 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 PRSS50Q9UI38 385 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ALG1L2C9J202 215 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 TBX19O60806 448 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ACAA1P09110 424 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 TSPO2Q5TGU0 170 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF547Q8IVP9 402 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 RBPMS2Q6ZRY4 209 aaKnown RBP8.54□□□□□ -1.04
CSMD1-217ENST00000602723 C4orf45Q96LM5 186 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 FOXQ1Q9C009 403 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 RALGAPA2Q2PPJ7 1873 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 LMO7DNF2Z398 122 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ISLRO14498 428 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF117Q03924 483 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ADAMTSL3P82987 1691 aa8.54□□□□□ -1.04
CSMD1-217ENST00000602723 ASPDHA6ND91 283 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 EPPINO95925 133 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 NPY1RP25929 384 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF83P51522 516 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 HLA-DRB5Q30154 266 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF766Q5HY98 468 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR5M9Q8NGP3 310 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 LPAR5Q9H1C0 372 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 FREM1Q5H8C1 2179 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 P01737 135 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 SBK3P0C264 359 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 PRRX1P54821 245 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF260Q3ZCT1 412 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 B3GNTL1Q67FW5 361 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 RIGQ13278 110 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 Q6ZNB5 142 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TBC1D26Q86UD7 250 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR5AU1Q8NGC0 362 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR13G1Q8NGZ3 307 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 LINC00615Q96LM1 132 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ANGPTL4Q9BY76 406 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TRDCB7Z8K6 153 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 APCSP02743 223 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 KHDC3LQ587J8 217 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 NCMAPQ5T1S8 102 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 LSMEM1Q8N8F7 131 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR52L2PQ8NGH6 319 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TSPAN32Q96QS1 320 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 SIRT7Q9NRC8 400 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 MYO18BQ8IUG5 2567 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 RPL30P62888 115 aaKnown RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 FLYWCH2Q96CP2 140 aaKnown RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 STARD10Q9Y365 291 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TGIF2LYQ8IUE0 185 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 C5orf17Q8NAS9 161 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ISOC2Q96AB3 205 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 FBXO17Q96EF6 278 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 FOXB1Q99853 325 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 LILRA5A6NI73 299 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 PDE6DO43924 150 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 PCMT1P22061 227 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF383Q8NA42 475 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR2D3Q8NGH3 330 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 PECRQ9BY49 303 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ACTL6AO96019 429 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 MELTFP08582 738 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 DAOP14920 347 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 NUFIP2Q7Z417 695 aaKnown RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 OR4A4PQ8NGN8 299 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 EXOGQ9Y2C4 368 aaKnown RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 AMMECR1Q9Y4X0 333 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 TNFSF15O95150 251 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-217ENST00000602723 HFEQ30201 348 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 HLA-BQ31612 363 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 COX19Q49B96 90 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 ZNF788Q6ZQV5 615 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 MCHR2Q969V1 340 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 GPR27Q9NS67 375 aa8.53□□□□□ -1.04
CSMD1-217ENST00000602723 THYN1Q9P016 225 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms