RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 APOBEC3DQ96AK3 386 aaPredicted RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ANAPC16Q96DE5 110 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 LINC00615Q96LM1 132 aaPredicted RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 P2RX4Q99571 388 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 NDFIP1Q9BT67 221 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 TMEM160Q9NX00 188 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 KCNIP1Q9NZI2 227 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 HS3ST2Q9Y278 367 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 PXMP4Q9Y6I8 212 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 V9GY05 133 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 SCN8AQ9UQD0 1980 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 BRWD3Q6RI45 1802 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 WIPF3A6NGB9 483 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 IFNL4K9M1U5 179 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 MLNRO43193 412 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.17
COMMD3-215ENST00000602574 PRSS3P35030 304 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 GATA4P43694 442 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 SOX2P48431 317 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 RRADP55042 308 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 ADIRFQ15847 76 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 ZNF787Q6DD87 383 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 ZNF621Q6ZSS3 439 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 TMEM256Q8N2U0 113 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 RYBPQ8N488 228 aaPredicted RBP7.71□□□□□ -1.17
COMMD3-215ENST00000602574 FGGYQ96C11 551 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 DERL3Q96Q80 235 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 VN1R1Q9GZP7 353 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 ST6GALNAC2Q9UJ37 374 aa7.71□□□□□ -1.17
COMMD3-215ENST00000602574 SAA2-SAA4A0A096LPE2 208 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 TSPAN11A1L157 253 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 LRP5LA4QPB2 252 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 C17orf112F2Z3M2 114 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF253O75346 499 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 DXOO77932 396 aaKnown RBP7.71□□□□□ -1.18
COMMD3-215ENST00000602574 UTS2O95399 124 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 DDAH2O95865 285 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 IFNA1P01562 189 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 PRH1P02810 166 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 LINC00869P0C866 280 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 SELPP16109 830 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 AOAHP28039 575 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 GALR1P47211 349 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 MTCP1P56278 107 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 SEC11AP67812 179 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.18
COMMD3-215ENST00000602574 RAB32Q13637 225 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 CPSF6Q16630 551 aaKnown RBP eCLIP7.71□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 BHLHA9Q7RTU4 235 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 MOGAT3Q86VF5 341 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 SLC35F2Q8IXU6 374 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF563Q8TA94 476 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 PPP1R35Q8TAP8 253 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 TNFRSF13CQ96RJ3 184 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 ST20Q9HBF5 79 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 MANBALQ9NQG1 85 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 MED29Q9NX70 200 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 JKAMPQ9P055 326 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 VSIG4Q9Y279 399 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF780BQ9Y6R6 833 aa7.71□□□□□ -1.18
COMMD3-215ENST00000602574 LOC102723971A0A1B0GUV8 181 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 A6NDN8 102 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 VENTXO95231 258 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 AREGP15514 252 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 MDKP21741 143 aaPredicted RBP7.7□□□□□ -1.18
COMMD3-215ENST00000602574 FCGR2CP31995 323 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 MANFP55145 182 aaKnown RBP7.7□□□□□ -1.18
COMMD3-215ENST00000602574 WIPI1Q5MNZ9 446 aaPredicted RBP7.7□□□□□ -1.18
COMMD3-215ENST00000602574 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 CST9LP1Q5W188 147 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 ASPHD2Q6ICH7 369 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM251Q8N6I4 163 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 OR10V1Q8NGI7 309 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 OR2T10Q8NGZ9 312 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 MRAPQ8TCY5 172 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 SMIM19Q96E16 107 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 TRIB1Q96RU8 372 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 GFI1Q99684 422 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 WDR61Q9GZS3 305 aaKnown RBP7.7□□□□□ -1.18
COMMD3-215ENST00000602574 CST11Q9H112 138 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 IGFLR1Q9H665 355 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 FAM206AQ9NX38 181 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 NAT8BQ9UHF3 227 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 ICAM5Q9UMF0 924 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 CKAP5Q14008 2032 aa7.7□□□□□ -1.18
COMMD3-215ENST00000602574 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 SLC22A20A6NK97 555 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 CEACAM4O75871 244 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 AMY2AP04746 511 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 RHOQP17081 205 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 LIM2P55344 173 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 Q0VG73 95 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 FUT5Q11128 374 aa7.69□□□□□ -1.18
COMMD3-215ENST00000602574 FUT7Q11130 342 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms