RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 COQ2Q96H96 371 aa18.24■□□□□ 0.51
SSBP4-209ENST00000601357 ABCB10Q9NRK6 738 aa18.24■□□□□ 0.51
SSBP4-209ENST00000601357 PITPNC1Q9UKF7 332 aa18.24■□□□□ 0.51
SSBP4-209ENST00000601357 FOXJ3Q9UPW0 622 aa18.24■□□□□ 0.51
SSBP4-209ENST00000601357 HILPDAQ9Y5L2 63 aa18.24■□□□□ 0.51
SSBP4-209ENST00000601357 ZNF44P15621 663 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 DCKP27707 260 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 MTNR1BP49286 362 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 SCN1BQ07699 218 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 PRAMEF5Q5TYX0 476 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 RPL22L1Q6P5R6 122 aaKnown RBP18.23■□□□□ 0.51
SSBP4-209ENST00000601357 BAIAP2L2Q6UXY1 529 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 Q6ZTK2 550 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 TMEM219Q86XT9 240 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 PXT1Q8NFP0 134 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 OR51A2Q8NGJ7 313 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 SERTAD4Q9NUC0 356 aa18.23■□□□□ 0.51
SSBP4-209ENST00000601357 ODAMA1E959 279 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 FAM90A22PA8MWA6 464 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 GABRPO00591 440 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 CLIC3O95833 236 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 IGLV1-47P01700 117 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 RAB3AP20336 220 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 CDK2P24941 298 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 PDLIM3Q53GG5 364 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-209ENST00000601357 OR52W1Q6IF63 320 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 RTN4RL2Q86UN3 420 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 ABHD12Q8N2K0 398 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 Q8NFD4 153 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 CNIH3Q8TBE1 160 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 STMN2Q93045 179 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 NKX3-1Q99801 234 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-209ENST00000601357 NOTCH1P46531 2555 aa18.22■□□□□ 0.51
SSBP4-209ENST00000601357 DEGS1O15121 323 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 HTR1DP28221 377 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 CD34P28906 385 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 GDNFP39905 211 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 BDH1Q02338 343 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 HABP2Q14520 560 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-209ENST00000601357 KRBOX4Q5JUW0 171 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 OR2G6Q5TZ20 316 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 ASCL4Q6XD76 172 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 OR51T1Q8NGJ9 327 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 NDNFQ8TB73 568 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 GPR148Q8TDV2 347 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 CPNE2Q96FN4 548 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-209ENST00000601357 TAS2R4Q9NYW5 299 aa18.21■□□□□ 0.51
SSBP4-209ENST00000601357 DIMT1Q9UNQ2 313 aaKnown RBP18.21■□□□□ 0.51
SSBP4-209ENST00000601357 SIRT4Q9Y6E7 314 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-209ENST00000601357 KIAA2026Q5HYC2 2103 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 F2RL2O00254 374 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 CSF1P09603 554 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 SOX2P48431 317 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 SLC34A1Q06495 639 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 ATXN7L3Q14CW9 347 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-209ENST00000601357 TMPRSS11AQ6ZMR5 421 aa18.2■□□□□ 0.5
SSBP4-209ENST00000601357 WIPF2Q8TF74 440 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-209ENST00000601357 PPIL3Q9H2H8 161 aaKnown RBP18.2■□□□□ 0.5
SSBP4-209ENST00000601357 A0A087X0M5 115 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 A0A1B0GX30 115 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 IRGMA1A4Y4 181 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 H0YJX3 145 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 MAGEB3O15480 346 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 OGG1O15527 345 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 ALDOBP05062 364 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 CGB3P0DN86 165 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 CGB7P0DN87 165 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 PTGFRP43088 359 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 LRRC36Q1X8D7 754 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 C17orf58Q2M2W7 97 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 HIST2H2BDQ6DRA6 164 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 PACRGLQ8N7B6 248 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 FAM110DQ8TAY7 271 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-209ENST00000601357 ZNF596Q8TC21 504 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 TNFAIP8L1Q8WVP5 186 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 TMEM106AQ96A25 262 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 NCOR1P1Q9H4R4 102 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 ZNF286AQ9HBT8 521 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 C8orf4Q9NR00 106 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 BABAM2Q9NXR7 383 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 DPM3Q9P2X0 92 aa18.19■□□□□ 0.5
SSBP4-209ENST00000601357 TRAV24A0A0B4J272 114 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 ZNF729A6NN14 1252 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-209ENST00000601357 LALBAP00709 142 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 CD2P06729 351 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 VSIG10L2P0DP72 767 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 ADARB1P78563 741 aaKnown RBP18.18■□□□□ 0.5
SSBP4-209ENST00000601357 PAX5Q02548 391 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 IL13RA2Q14627 380 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 TTC23Q5W5X9 447 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 SATL1Q86VE3 508 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 C11orf44Q8N8P7 122 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 SMIM19Q96E16 107 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 GPER1Q99527 375 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 PRSS22Q9GZN4 317 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 OR6C3Q9NZP0 311 aa18.18■□□□□ 0.5
SSBP4-209ENST00000601357 EXOSC1Q9Y3B2 195 aaKnown RBP18.18■□□□□ 0.5
SSBP4-209ENST00000601357 PRKDCP78527 4128 aaKnown RBP18.17■□□□□ 0.5
SSBP4-209ENST00000601357 UTF1Q5T230 341 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms