RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ACKR3P25106 362 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 BLVRBP30043 206 aaPredicted RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 PMELP40967 661 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 SNU13P55769 128 aaKnown RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 PPP1CBP62140 327 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 SNTB1Q13884 538 aaKnown RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 IGFBP7Q16270 282 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 C4orf17Q53FE4 359 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 AADACL3Q5VUY0 350 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 C1orf174Q8IYL3 243 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 OR10K1Q8NGX5 313 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 RNASE6Q93091 150 aaKnown RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 TMEM230Q96A57 120 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 OR51B6Q9H340 312 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 BARX1Q9HBU1 254 aaPredicted RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 TUBG2Q9NRH3 451 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 MBD2Q9UBB5 411 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 C5orf51A6NDU8 294 aa10□□□□□ -0.81
VRK3-223ENST00000601341 CRYAAP02489 173 aa10□□□□□ -0.81
VRK3-223ENST00000601341 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
VRK3-223ENST00000601341 SERPINF1P36955 418 aa10□□□□□ -0.81
VRK3-223ENST00000601341 UQCRFS1P47985 274 aa10□□□□□ -0.81
VRK3-223ENST00000601341 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
VRK3-223ENST00000601341 CHRFAM7AQ494W8 412 aa10□□□□□ -0.81
VRK3-223ENST00000601341 CLEC18BQ6UXF7 455 aa10□□□□□ -0.81
VRK3-223ENST00000601341 FBXW12Q6X9E4 464 aa10□□□□□ -0.81
VRK3-223ENST00000601341 LHFPL2Q6ZUX7 228 aa10□□□□□ -0.81
VRK3-223ENST00000601341 RNF144BQ7Z419 303 aa10□□□□□ -0.81
VRK3-223ENST00000601341 CASTOR1Q8WTX7 329 aa10□□□□□ -0.81
VRK3-223ENST00000601341 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
VRK3-223ENST00000601341 SEC22AQ96IW7 307 aa10□□□□□ -0.81
VRK3-223ENST00000601341 LINC00052Q96N35 136 aa10□□□□□ -0.81
VRK3-223ENST00000601341 BBC3Q96PG8 261 aaPredicted RBP10□□□□□ -0.81
VRK3-223ENST00000601341 AQP10Q96PS8 301 aa10□□□□□ -0.81
VRK3-223ENST00000601341 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
VRK3-223ENST00000601341 ZNF471Q9BX82 626 aaPredicted RBP10□□□□□ -0.81
VRK3-223ENST00000601341 BCL2L14Q9BZR8 327 aa10□□□□□ -0.81
VRK3-223ENST00000601341 METTL9Q9H1A3 318 aa10□□□□□ -0.81
VRK3-223ENST00000601341 KCNJ16Q9NPI9 418 aa10□□□□□ -0.81
VRK3-223ENST00000601341 SMG1Q96Q15 3661 aaKnown RBP10□□□□□ -0.81
VRK3-223ENST00000601341 ZNF816-ZNF321PA0A0X1KG74 233 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 CCSO14618 274 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 RPS2P15880 293 aaKnown RBP9.99□□□□□ -0.81
VRK3-223ENST00000601341 LUMP51884 338 aaPredicted RBP9.99□□□□□ -0.81
VRK3-223ENST00000601341 EIF5AP63241 154 aaKnown RBP9.99□□□□□ -0.81
VRK3-223ENST00000601341 SUPT4H1P63272 117 aaKnown RBP9.99□□□□□ -0.81
VRK3-223ENST00000601341 PRSS54Q6PEW0 395 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 C22orf34Q6ZV56 151 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 C1QL2Q7Z5L3 287 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 CSNK2A3Q8NEV1 391 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 OR56B2PQ8NGI1 322 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 OR1J1Q8NGS3 322 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 OR13G1Q8NGZ3 307 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 C2orf50Q96LR7 162 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 TMEM100Q9NV29 134 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 C14orf166Q9Y224 244 aaKnown RBP9.99□□□□□ -0.81
VRK3-223ENST00000601341 ESPL1Q14674 2120 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
VRK3-223ENST00000601341 LOC105371267A0A1B0GV96 52 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 A0A1W2PP11 408 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 CD300LBA8K4G0 201 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 FAM25EA8MYX2 175 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 PRSS44E7EML9 344 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 F5H0A9 414 aaPredicted RBP9.98□□□□□ -0.81
VRK3-223ENST00000601341 TAAR5O14804 337 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 FGF16O43320 207 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 TPD52L2O43399 206 aaKnown RBP9.98□□□□□ -0.81
VRK3-223ENST00000601341 RAC2P15153 192 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 NPY4RP50391 375 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 PRSS12P56730 875 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 IL15RAQ13261 267 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 SPATA46Q5T0L3 261 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 TMEM108Q6UXF1 575 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 SPERTQ8NA61 448 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 OR2J1Q9GZK6 312 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 NGBQ9NPG2 151 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 C1orf123Q9NWV4 160 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 EHFQ9NZC4 300 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 NDRG3Q9UGV2 375 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 NKX2-6A6NCS4 301 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 NRASP01111 189 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 THBDP07204 575 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 CTSDP07339 412 aaPredicted RBP9.98□□□□□ -0.81
VRK3-223ENST00000601341 SERPINA2P20848 420 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 AGAP20933 346 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 PTAFRP25105 342 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 CD40P25942 277 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 RBP2P50120 134 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 MTCP1P56278 107 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 SLC25A40Q8TBP6 338 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms